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    BCAT1 branched chain amino acid transaminase 1 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100337981, updated on 10-Oct-2024

    Summary

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    Gene symbol
    BCAT1
    Gene description
    branched chain amino acid transaminase 1
    See related
    Ensembl:ENSOCUG00000003963
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See BCAT1 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 8 NC_067381.1 (96342269..96480480, complement)

    Chromosome 8 - NC_067381.1Genomic Context describing neighboring genes Neighboring gene SRY-box transcription factor 5 Neighboring gene uncharacterized LOC127492146 Neighboring gene uncharacterized LOC108176988 Neighboring gene U2 spliceosomal RNA Neighboring gene transcription initiation factor IIA subunit 2-like Neighboring gene inositol 1,4,5-triphosphate receptor associated 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067381.1 Chromosome 8 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables branched-chain-amino-acid transaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-leucine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in L-valine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    branched-chain-amino-acid aminotransferase, cytosolic
    Names
    branched chain amino-acid transaminase 1, cytosolic

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067381.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      96342269..96480480 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051850336.1 → XP_051706296.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X2

      UniProtKB/TrEMBL
      A0A5F9CUM6

    2. XM_008259519.3 → XP_008257741.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X1

      UniProtKB/TrEMBL
      A0A5F9CJ60
      Related
      ENSOCUP00000033736.1
      Conserved Domains (2) summary
      PRK13357
      Location:100 → 445
      PRK13357; branched-chain amino acid aminotransferase; Provisional
      cd01557
      Location:147 → 442
      BCAT_beta_family; BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and ...

    3. XM_008259521.3 → XP_008257743.1  branched-chain-amino-acid aminotransferase, cytosolic isoform X3

      UniProtKB/TrEMBL
      A0A5F9CJ60, G1SKT0
      Related
      ENSOCUP00000003437.4
      Conserved Domains (2) summary
      PRK13357
      Location:35 → 380
      PRK13357; branched-chain amino acid aminotransferase; Provisional
      cd01557
      Location:82 → 377
      BCAT_beta_family; BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and ...
    Nucleotide Protein
    Heading Accession and Version

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