HOXA3 homeobox A3 [Oryctolagus cuniculus (rabbit)] - Gene

Summary

Gene symbol: HOXA3
Gene description: homeobox A3
Gene type: protein coding
RefSeq status: INFERRED
Organism: Oryctolagus cuniculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Annotation information: Annotation category: partial on reference assembly
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 10

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2023_02	current	UM_NZW_1.0 (GCF_009806435.1)	10	NC_067383.1 (8872481..8875632, complement)

Chromosome 10 - NC_067383.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_067383.1 Chromosome 10 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

Hoxa3 (e-PCR), detects polymorphism
- UniSTS:143367

REN100363 (e-PCR)
- UniSTS:425160

REN100364 (e-PCR)
- UniSTS:425161

REN100365 (e-PCR)
- UniSTS:425162

REN100375 (e-PCR)
- UniSTS:425172

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific	IEA Inferred from Electronic Annotation more info	PubMed
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: homeobox protein Hox-A3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001171399.1 → NP_001164870.1 homeobox protein Hox-A3

See identical proteins and their annotated locations for NP_001164870.1

Status: INFERRED

Source sequence(s)

DP001063

UniProtKB/TrEMBL

B7NZT3, G1TFK9

Conserved Domains (2) summary

pfam00046
Location:195 → 247

Homeobox; Homeobox domain

pfam13293
Location:377 → 441

DUF4074; Domain of unknown function (DUF4074)