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    HOXA1 homeobox A1 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100328782, updated on 8-Mar-2024

    Summary

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    Gene symbol
    HOXA1
    Gene description
    homeobox A1
    See related
    Ensembl:ENSOCUG00000015215
    Gene type
    protein coding
    RefSeq status
    INFERRED
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See HOXA1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 10 NC_067383.1 (8859072..8860574, complement)

    Chromosome 10 - NC_067383.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103349489 Neighboring gene uncharacterized LOC127492658 Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene uncharacterized LOC108177218 Neighboring gene homeobox A2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067383.1 Chromosome 10 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    homeobox protein Hox-A1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001171397.1 → NP_001164868.1  homeobox protein Hox-A1

      See identical proteins and their annotated locations for NP_001164868.1

      Status: INFERRED

      Source sequence(s)
      DP001063
      UniProtKB/TrEMBL
      B7NZT1
      Related
      ENSOCUP00000020219.1, ENSOCUT00000028056.1
      Conserved Domains (2) summary
      COG5576
      Location:178 → 288
      COG5576; Homeodomain-containing transcription factor [Transcription]
      pfam00046
      Location:235 → 287
      Homeobox; Homeobox domain

    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067383.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      8859072..8860574 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008261494.3 → XP_008259716.1  homeobox protein Hox-A1 isoform X1

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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