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    IDH1 isocitrate dehydrogenase (NADP(+)) 1 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100328559, updated on 8-Mar-2024

    Summary

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    Gene symbol
    IDH1
    Gene description
    isocitrate dehydrogenase (NADP(+)) 1
    See related
    Ensembl:ENSOCUG00000002671
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See IDH1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 7 NC_067380.1 (24474193..24494225)

    Chromosome 7 - NC_067380.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L21-like Neighboring gene phosphoinositide kinase, FYVE-type zinc finger containing Neighboring gene cytochrome c oxidase subunit 4 isoform 1, mitochondrial-like Neighboring gene chromosome 7 C2orf80 homolog

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067380.1 Chromosome 7 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Housekeeping genes for phylogenetic analysis of eutherian relationships. Kullberg M, et al. Mol Biol Evol, 2006 Aug. PMID 16751257
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables isocitrate dehydrogenase (NADP+) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in isocitrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    isocitrate dehydrogenase [NADP] cytoplasmic
    Names
    isocitrate dehydrogenase (NADP(+)) 1, cytosolic
    isocitrate dehydrogenase 1 (NADP+), soluble

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067380.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      24474193..24494225
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002712618.4 → XP_002712664.1  isocitrate dehydrogenase [NADP] cytoplasmic

      UniProtKB/TrEMBL
      A0A5F9CXT8, G1SI20
      Related
      ENSOCUP00000038627.1
      Conserved Domains (1) summary
      PTZ00435
      Location:1 → 411
      PTZ00435; isocitrate dehydrogenase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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