U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    CSNK2A1 casein kinase 2 alpha 1 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100301533, updated on 8-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    CSNK2A1
    Gene description
    casein kinase 2 alpha 1
    See related
    Ensembl:ENSOCUG00000014722
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Also known as
    CK-II; CSNK1A1
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CSNK2A1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 4 NC_067377.1 (15720117..15744786, complement)

    Chromosome 4 - NC_067377.1Genomic Context describing neighboring genes Neighboring gene RANBP2-type and C3HC4-type zinc finger containing 1 Neighboring gene TBC1 domain family member 20 Neighboring gene transcription factor 15 Neighboring gene sulfiredoxin 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_067377.1 Chromosome 4 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. PCR cloning and sequence of two cDNAs encoding the alpha and beta subunits of rabbit casein kinase-II. Gupta SK, et al. Gene, 1993 Feb 28. PMID 8444352
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of protein kinase CK2 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    casein kinase II subunit alpha
    Names
    CK II alpha
    casein kinase 2, alpha 1 polypeptide
    casein kinase 2, alpha subunit
    NP_001153756.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001160284.1 → NP_001153756.1  casein kinase II subunit alpha

      See identical proteins and their annotated locations for NP_001153756.1

      Status: PROVISIONAL

      Source sequence(s)
      M98451
      UniProtKB/Swiss-Prot
      P33674
      UniProtKB/TrEMBL
      A0A5F9CDI0
      Related
      ENSOCUP00000019122.1, ENSOCUT00000026103.2
      Conserved Domains (3) summary
      cd14132
      Location:20 → 325
      STKc_CK2_alpha; Catalytic subunit (alpha) of the Serine/Threonine Kinase, Casein Kinase 2
      pfam00069
      Location:39 → 324
      Pkinase; Protein kinase domain
      pfam12484
      Location:332 → 389
      PE_PPE_C; Polymorphic PE/PPE proteins C terminal

    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067377.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      15720117..15744786 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P33674.1 GenPept UniProtKB/Swiss-Prot:P33674

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.