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    LPCAT1 lysophosphatidylcholine acyltransferase 1 [ Sus scrofa (pig) ]

    Gene ID: 100217397, updated on 8-Mar-2024

    Summary

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    Official Symbol
    LPCAT1provided by VGNC
    Official Full Name
    lysophosphatidylcholine acyltransferase 1provided by VGNC
    Primary source
    VGNC:VGNC:89788
    See related
    Ensembl:ENSSSCG00000017116
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Broad expression in lung (RPKM 31.3), spleen (RPKM 16.7) and 5 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See LPCAT1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 16 NC_010458.4 (79134396..79173775)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 16 NC_010458.3 (85797427..85837645)

    Chromosome 16 - NC_010458.4Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L36 Neighboring gene uncharacterized LOC106506585 Neighboring gene solute carrier family 6 member 3 Neighboring gene CLPTM1 like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables O-acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lysophosphatidylcholine acyltransferase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010458.4 Reference Sscrofa11.1 Primary Assembly

      Range
      79134396..79173775
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005672624.3 → XP_005672681.1  lysophosphatidylcholine acyltransferase 1 isoform X3

      UniProtKB/TrEMBL
      A0A8D1EH62
      Conserved Domains (4) summary
      cd07991
      Location:103 → 322
      LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like
      COG0204
      Location:58 → 250
      PlsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]
      pfam13499
      Location:429 → 487
      EF-hand_7; EF-hand domain pair
      pfam13833
      Location:440 → 489
      EF-hand_8; EF-hand domain pair

    2. XM_003134168.5 → XP_003134216.1  lysophosphatidylcholine acyltransferase 1 isoform X4

      UniProtKB/TrEMBL
      A0A4X1TM25, A0A8D1EH62, F1S029
      Related
      ENSSSCP00000018133.2, ENSSSCT00000018634.5
      Conserved Domains (4) summary
      cd07991
      Location:103 → 314
      LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like
      COG0204
      Location:58 → 242
      PlsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]
      pfam13499
      Location:421 → 479
      EF-hand_7; EF-hand domain pair
      pfam13833
      Location:432 → 481
      EF-hand_8; EF-hand domain pair

    3. XM_021076663.1 → XP_020932322.1  lysophosphatidylcholine acyltransferase 1 isoform X6

      UniProtKB/TrEMBL
      A0A5G2QFH5, A0A8D0YQ67
      Conserved Domains (3) summary
      cd07991
      Location:55 → 274
      LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like
      cd15897
      Location:344 → 379
      EFh_PEF; EF-hand motif [structural motif]
      cl25352
      Location:321 → 445
      EFh_PEF; The penta-EF hand (PEF) family

    4. XM_021076662.1 → XP_020932321.1  lysophosphatidylcholine acyltransferase 1 isoform X5

      UniProtKB/TrEMBL
      A0A5G2QFH5, A0A8D0YQ67
      Conserved Domains (3) summary
      cd07991
      Location:76 → 295
      LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like
      cd15897
      Location:365 → 400
      EFh_PEF; EF-hand motif [structural motif]
      cl25352
      Location:342 → 466
      EFh_PEF; The penta-EF hand (PEF) family

    5. XM_021076660.1 → XP_020932319.1  lysophosphatidylcholine acyltransferase 1 isoform X1

      UniProtKB/TrEMBL
      A0A5G2QFH5, A0A8D0YQ67
      Conserved Domains (3) summary
      cd07991
      Location:112 → 331
      LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like
      cd15897
      Location:401 → 436
      EFh_PEF; EF-hand motif [structural motif]
      cl25352
      Location:378 → 502
      EFh_PEF; The penta-EF hand (PEF) family

    6. XM_021076659.1 → XP_020932318.1  lysophosphatidylcholine acyltransferase 1 isoform X1

      UniProtKB/TrEMBL
      A0A5G2QFH5, A0A8D0YQ67
      Conserved Domains (3) summary
      cd07991
      Location:112 → 331
      LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like
      cd15897
      Location:401 → 436
      EFh_PEF; EF-hand motif [structural motif]
      cl25352
      Location:378 → 502
      EFh_PEF; The penta-EF hand (PEF) family

    7. XM_021076661.1 → XP_020932320.1  lysophosphatidylcholine acyltransferase 1 isoform X2

      UniProtKB/TrEMBL
      A0A5G2QFH5, A0A8D0YQ67
      Conserved Domains (3) summary
      cd07991
      Location:112 → 323
      LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like
      cd15897
      Location:393 → 428
      EFh_PEF; EF-hand motif [structural motif]
      cl25352
      Location:370 → 494
      EFh_PEF; The penta-EF hand (PEF) family

    8. XM_021076664.1 → XP_020932323.1  lysophosphatidylcholine acyltransferase 1 isoform X6

      UniProtKB/TrEMBL
      A0A5G2QFH5, A0A8D0YQ67
      Related
      ENSSSCP00000062490.1, ENSSSCT00000070458.1
      Conserved Domains (3) summary
      cd07991
      Location:55 → 274
      LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like
      cd15897
      Location:344 → 379
      EFh_PEF; EF-hand motif [structural motif]
      cl25352
      Location:321 → 445
      EFh_PEF; The penta-EF hand (PEF) family
    Nucleotide Protein
    Heading Accession and Version

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