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    LGALS12 galectin 12 [ Sus scrofa (pig) ]

    Gene ID: 100217395, updated on 17-Aug-2024

    Summary

    Official Symbol
    LGALS12provided by VGNC
    Official Full Name
    galectin 12provided by VGNC
    Primary source
    VGNC:VGNC:89692
    See related
    Ensembl:ENSSSCG00000013056
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Restricted expression toward subcutaneous adipose (RPKM 34.5) See more
    Orthologs
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    Genomic context

    See LGALS12 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 2 NC_010444.4 (8454362..8475360, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 2 NC_010444.3 (7840530..7852683)

    Chromosome 2 - NC_010444.4Genomic Context describing neighboring genes Neighboring gene phospholipase A and acyltransferase 3 Neighboring gene uncharacterized LOC106509324 Neighboring gene phospholipase A and acyltransferase 5 Neighboring gene solute carrier family 22 member 9-like Neighboring gene uncharacterized LOC110259242 Neighboring gene solute carrier family 22 member 9-like

    Genomic regions, transcripts, and products

    Expression

    • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    General protein information

    Preferred Names
    galectin-12
    Names
    lectin, galactoside-binding, soluble, 12

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001142844.1NP_001136316.1  galectin-12

      See identical proteins and their annotated locations for NP_001136316.1

      Status: PROVISIONAL

      Source sequence(s)
      FJ424707
      UniProtKB/TrEMBL
      A0A288CFZ2, A0A8D0TMF0, A0A8D1BZS8, A0A8D1ERJ0, A0A8D1IW26, B7U2G9, F1RPX8
      Related
      ENSSSCP00000013885.5, ENSSSCT00000014271.5
      Conserved Domains (1) summary
      smart00908
      Location:33158
      Gal-bind_lectin; Galactoside-binding lectin

    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010444.4 Reference Sscrofa11.1 Primary Assembly

      Range
      8454362..8475360 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013987256.2XP_013842710.1  galectin-12 isoform X2

      UniProtKB/TrEMBL
      A0A8D0TMF0, A0A8D1IW26
      Conserved Domains (1) summary
      smart00908
      Location:1119
      Gal-bind_lectin; Galactoside-binding lectin
    2. XM_013987255.2XP_013842709.1  galectin-12 isoform X1

      UniProtKB/TrEMBL
      A0A8D0TMF0, A0A8D1ERJ0, A0A8D1IW26
      Conserved Domains (1) summary
      smart00908
      Location:33158
      Gal-bind_lectin; Galactoside-binding lectin

    RNA

    1. XR_002339813.1 RNA Sequence

    2. XR_002339812.1 RNA Sequence