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    CD63 CD63 molecule [ Sus scrofa (pig) ]

    Gene ID: 100155929, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CD63provided by VGNC
    Official Full Name
    CD63 moleculeprovided by VGNC
    Primary source
    VGNC:VGNC:86424
    See related
    Ensembl:ENSSSCG00000000361
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Ubiquitous expression in subcutaneous adipose (RPKM 380.8), lung (RPKM 326.8) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See CD63 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 5 NC_010447.5 (21172275..21176225, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 5 NC_010447.4 (22652127..22656077, complement)

    Chromosome 5 - NC_010447.5Genomic Context describing neighboring genes Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 1 Neighboring gene basic proline-rich protein-like Neighboring gene uncharacterized LOC102162669 Neighboring gene retinol dehydrogenase 5 Neighboring gene growth differentiation factor 11 Neighboring gene SAP domain containing ribonucleoprotein Neighboring gene uncharacterized LOC110260684

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CD63 antigen

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010447.5 Reference Sscrofa11.1 Primary Assembly

      Range
      21172275..21176225 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005663878.2 → XP_005663935.1  CD63 antigen

      See identical proteins and their annotated locations for XP_005663935.1

      UniProtKB/TrEMBL
      A0A0B8RZP2, A0A4X1W430, A0A8D0RSP8, A0A8D1BVN9, F1SPK8
      Related
      ENSSSCP00000029639.1, ENSSSCT00000033233.4
      Conserved Domains (2) summary
      cd03166
      Location:105 → 201
      CD63_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), CD63 family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans ...
      pfam00335
      Location:10 → 226
      Tetraspannin; Tetraspanin family
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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