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    GPR161 G protein-coupled receptor 161 [ Sus scrofa (pig) ]

    Gene ID: 100155594, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GPR161provided by VGNC
    Official Full Name
    G protein-coupled receptor 161provided by VGNC
    Primary source
    VGNC:VGNC:88613
    See related
    Ensembl:ENSSSCG00000006302
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Broad expression in ovary (RPKM 5.0), lung (RPKM 1.7) and 7 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See GPR161 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 4 NC_010446.5 (82844944..82909329)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 4 NC_010446.4 (90518333..90577014)

    Chromosome 4 - NC_010446.5Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106510103 Neighboring gene TOR signaling pathway regulator Neighboring gene uncharacterized LOC100525571 Neighboring gene DDB1 and CUL4 associated factor 6 Neighboring gene microRNA mir-9810 Neighboring gene mitochondrial pyruvate carrier 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in recycling endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    G-protein coupled receptor 161

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010446.5 Reference Sscrofa11.1 Primary Assembly

      Range
      82844944..82909329
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021089471.1 → XP_020945130.1  G-protein coupled receptor 161 isoform X1

      UniProtKB/TrEMBL
      A0A480DNN5, A0A8D0S098, A0A8D1WVV5
      Related
      ENSSSCP00000074422.1, ENSSSCT00000074790.2
      Conserved Domains (1) summary
      cd15214
      Location:29 → 335
      7tmA_GPR161; orphan G protein-coupled receptor 161, member of the class A family of seven-transmembrane G protein-coupled receptors

    2. XM_021089473.1 → XP_020945132.1  G-protein coupled receptor 161 isoform X1

      UniProtKB/TrEMBL
      A0A480DNN5, A0A8D0S098, A0A8D1WVV5
      Related
      ENSSSCP00000006719.4, ENSSSCT00000006907.5
      Conserved Domains (1) summary
      cd15214
      Location:29 → 335
      7tmA_GPR161; orphan G protein-coupled receptor 161, member of the class A family of seven-transmembrane G protein-coupled receptors

    3. XM_021089474.1 → XP_020945133.1  G-protein coupled receptor 161 isoform X1

      UniProtKB/TrEMBL
      A0A480DNN5, A0A8D0S098, A0A8D1WVV5
      Conserved Domains (1) summary
      cd15214
      Location:29 → 335
      7tmA_GPR161; orphan G protein-coupled receptor 161, member of the class A family of seven-transmembrane G protein-coupled receptors

    4. XM_021089475.1 → XP_020945134.1  G-protein coupled receptor 161 isoform X2

      UniProtKB/TrEMBL
      A0A8D0NCG4, A0A8D1KA35
      Related
      ENSSSCP00000065968.1, ENSSSCT00000073840.2
      Conserved Domains (2) summary
      cd14964
      Location:14 → 30
      7tm_GPCRs; TM helix 4 [structural motif]
      cl28897
      Location:1 → 203
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    Nucleotide Protein
    Heading Accession and Version

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