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    NUS1 NUS1 dehydrodolichyl diphosphate synthase subunit [ Sus scrofa (pig) ]

    Gene ID: 100154658, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NUS1provided by VGNC
    Official Full Name
    NUS1 dehydrodolichyl diphosphate synthase subunitprovided by VGNC
    Primary source
    VGNC:VGNC:90990
    See related
    Ensembl:ENSSSCG00000020885
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Ubiquitous expression in kidney (RPKM 13.2), lung (RPKM 11.4) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See NUS1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 1 NC_010443.5 (44156771..44186224, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 1 NC_010443.4 (49503144..49532778, complement)

    Chromosome 1 - NC_010443.5Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member F1 Neighboring gene uncharacterized LOC110260250 Neighboring gene nephrocan Neighboring gene golgi associated PDZ and coiled-coil motif containing

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    Related articles in PubMed

    1. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables dehydrodolichyl diphosphate synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in dolichol biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of dehydrodolichyl diphosphate synthase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dehydrodolichyl diphosphate synthase complex subunit NUS1
    Names
    nuclear undecaprenyl pyrophosphate synthase 1 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010443.5 Reference Sscrofa11.1 Primary Assembly

      Range
      44156771..44186224 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001928072.7 → XP_001928107.4  dehydrodolichyl diphosphate synthase complex subunit NUS1

      UniProtKB/TrEMBL
      A0A4X1TET5, A0A8D0N655, A0A8D1FH46, I3LLX5
      Related
      ENSSSCP00000025095.2, ENSSSCT00000030561.3
      Conserved Domains (1) summary
      COG0020
      Location:120 → 293
      UppS; Undecaprenyl pyrophosphate synthase [Lipid transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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