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    FOXH1 forkhead box H1 [ Sus scrofa (pig) ]

    Gene ID: 100154027, updated on 17-Aug-2024

    Summary

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    Official Symbol
    FOXH1provided by VGNC
    Official Full Name
    forkhead box H1provided by VGNC
    Primary source
    VGNC:VGNC:88207
    See related
    Ensembl:ENSSSCG00000005902
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    human mouse all
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    Genomic context

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    See FOXH1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 4 NC_010446.5 (320610..324570)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 4 NC_010446.4 (411723..415556)

    Chromosome 4 - NC_010446.5Genomic Context describing neighboring genes Neighboring gene glutamic--pyruvic transaminase Neighboring gene protein phosphatase 1 regulatory subunit 16A Neighboring gene kinesin family member C2 Neighboring gene transmembrane protein 276

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    forkhead box protein H1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010446.5 Reference Sscrofa11.1 Primary Assembly

      Range
      320610..324570
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021090533.1 → XP_020946192.1  forkhead box protein H1 isoform X1

      UniProtKB/TrEMBL
      A0A8D1EPH6, A0A8D1UBE4
      Conserved Domains (1) summary
      cd00059
      Location:33 → 111
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...

    2. XM_021090534.1 → XP_020946193.1  forkhead box protein H1 isoform X1

      UniProtKB/TrEMBL
      A0A8D1EPH6, A0A8D1UBE4
      Related
      ENSSSCP00000006310.3, ENSSSCT00000006481.4
      Conserved Domains (1) summary
      cd00059
      Location:33 → 111
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...

    3. XM_021090535.1 → XP_020946194.1  forkhead box protein H1 isoform X2

      UniProtKB/TrEMBL
      A0A8D1UBE4
      Conserved Domains (1) summary
      cd00059
      Location:1 → 71
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...

    4. XM_001925280.4 → XP_001925315.1  forkhead box protein H1 isoform X1

      UniProtKB/TrEMBL
      A0A8D1EPH6, A0A8D1UBE4
      Conserved Domains (1) summary
      cd00059
      Location:33 → 111
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...

    5. XM_013996400.2 → XP_013851854.1  forkhead box protein H1 isoform X1

      UniProtKB/TrEMBL
      A0A8D1EPH6, A0A8D1UBE4
      Conserved Domains (1) summary
      cd00059
      Location:33 → 111
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
    Nucleotide Protein
    Heading Accession and Version

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