U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    WBP4 WW domain binding protein 4 [ Equus caballus (horse) ]

    Gene ID: 100147547, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    WBP4provided by VGNC
    Official Full Name
    WW domain binding protein 4provided by VGNC
    Primary source
    VGNC:VGNC:24974
    See related
    Ensembl:ENSECAG00000021033
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See WBP4 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 17 NC_009160.3 (28852134..28880175, complement)

    Chromosome 17 - NC_009160.3Genomic Context describing neighboring genes Neighboring gene kelch repeat and BTB domain containing 7 Neighboring gene kelch repeat and BTB domain containing 6 Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene E74 like ETS transcription factor 1 Neighboring gene SGT1 homolog, MIS12 kinetochore complex assembly cochaperone

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_009160.3 Chromosome 17 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of precatalytic spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    WW domain-binding protein 4
    Names
    WW domain-binding protein 4-like protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009160.3 Reference EquCab3.0 Primary Assembly

      Range
      28852134..28880175 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005601260.3 → XP_005601317.1  WW domain-binding protein 4 isoform X2

      See identical proteins and their annotated locations for XP_005601317.1

      UniProtKB/TrEMBL
      A0A9L0R4P4, F6VHH0
      Related
      ENSECAP00000057825.1, ENSECAT00000089174.1
      Conserved Domains (2) summary
      pfam06220
      Location:8 → 44
      zf-U1; U1 zinc finger
      pfam00397
      Location:166 → 191
      WW; WW domain

    2. XM_001915397.5 → XP_001915432.2  WW domain-binding protein 4 isoform X1

      UniProtKB/TrEMBL
      A0A9L0ST76
      Related
      ENSECAP00000077194.1, ENSECAT00000147364.1
      Conserved Domains (2) summary
      pfam06220
      Location:48 → 84
      zf-U1; U1 zinc finger
      pfam00397
      Location:206 → 231
      WW; WW domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials