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    MAGED1 MAGE family member D1 [ Equus caballus (horse) ]

    Gene ID: 100147318, updated on 17-Aug-2024

    Summary

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    Gene symbol
    MAGED1
    Gene description
    MAGE family member D1
    See related
    Ensembl:ENSECAG00000040088
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See MAGED1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) X NC_009175.3 (43024698..43082919)

    Chromosome X - NC_009175.3Genomic Context describing neighboring genes Neighboring gene melanoma-associated antigen D4-like Neighboring gene small nucleolar RNA SNORA11 Neighboring gene G1 to S phase transition 2 Neighboring gene ankyrin repeat and SOCS box containing 1 Neighboring gene 5'-aminolevulinate synthase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009175.3 Chromosome X Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    melanoma-associated antigen D1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009175.3 Reference EquCab3.0 Primary Assembly

      Range
      43024698..43082919
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023633728.1 → XP_023489496.1  melanoma-associated antigen D1

      UniProtKB/TrEMBL
      A0A3Q2HPH1
      Related
      ENSECAP00000035961.2, ENSECAT00000051633.3
      Conserved Domains (3) summary
      pfam01454
      Location:483 → 643
      MAGE; MAGE family
      cl26386
      Location:45 → 339
      DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
      cl28087
      Location:273 → 407
      FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]

    2. XM_023633729.1 → XP_023489497.1  melanoma-associated antigen D1

      UniProtKB/TrEMBL
      A0A3Q2HPH1
      Related
      ENSECAP00000045100.3, ENSECAT00000041655.3
      Conserved Domains (3) summary
      pfam01454
      Location:483 → 643
      MAGE; MAGE family
      cl26386
      Location:45 → 339
      DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
      cl28087
      Location:273 → 407
      FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]

    3. XM_023633726.1 → XP_023489494.1  melanoma-associated antigen D1

      UniProtKB/TrEMBL
      A0A3Q2HPH1
      Related
      ENSECAP00000088305.1, ENSECAT00000136079.1
      Conserved Domains (3) summary
      pfam01454
      Location:483 → 643
      MAGE; MAGE family
      cl26386
      Location:45 → 339
      DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
      cl28087
      Location:273 → 407
      FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]

    4. XM_023633725.1 → XP_023489493.1  melanoma-associated antigen D1

      UniProtKB/TrEMBL
      A0A3Q2HPH1
      Conserved Domains (3) summary
      pfam01454
      Location:483 → 643
      MAGE; MAGE family
      cl26386
      Location:45 → 339
      DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
      cl28087
      Location:273 → 407
      FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein
    Heading Accession and Version

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