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    ECHDC1 ethylmalonyl-CoA decarboxylase 1 [ Equus caballus (horse) ]

    Gene ID: 100073045, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ECHDC1provided by VGNC
    Official Full Name
    ethylmalonyl-CoA decarboxylase 1provided by VGNC
    Primary source
    VGNC:VGNC:17405
    See related
    Ensembl:ENSECAG00000020652
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See ECHDC1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 10 NC_009153.3 (75217660..75284953, complement)

    Chromosome 10 - NC_009153.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111775369 Neighboring gene R-spondin 3 Neighboring gene uncharacterized LOC111775371 Neighboring gene ring finger protein 146 Neighboring gene uncharacterized LOC111775372 Neighboring gene KIAA0408 Neighboring gene MTCL family member 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009153.3 Chromosome 10 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid beta-oxidation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ethylmalonyl-CoA decarboxylase
    Names
    enoyl CoA hydratase domain containing 1
    enoyl-CoA hydratase domain-containing 1-like protein
    enoyl-CoA hydratase domain-containing protein-like protein
    NP_001296163.1
    XP_023505171.1
    XP_023505172.1
    XP_023505173.1
    XP_023505174.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001309234.1 → NP_001296163.1  ethylmalonyl-CoA decarboxylase

      See identical proteins and their annotated locations for NP_001296163.1

      Status: VALIDATED

      Source sequence(s)
      JL616276
      UniProtKB/TrEMBL
      F6TDD3, K9K4E3
      Related
      ENSECAP00000046142.3, ENSECAT00000061901.3
      Conserved Domains (1) summary
      cd06558
      Location:55 → 251
      crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009153.3 Reference EquCab3.0 Primary Assembly

      Range
      75217660..75284953 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023649406.1 → XP_023505174.1  ethylmalonyl-CoA decarboxylase isoform X2

      UniProtKB/TrEMBL
      F6TDD3
      Conserved Domains (1) summary
      cd06558
      Location:49 → 245
      crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

    2. XM_023649404.1 → XP_023505172.1  ethylmalonyl-CoA decarboxylase isoform X1

      UniProtKB/TrEMBL
      F6TDD3
      Conserved Domains (1) summary
      cd06558
      Location:68 → 264
      crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

    3. XM_023649403.1 → XP_023505171.1  ethylmalonyl-CoA decarboxylase isoform X1

      UniProtKB/TrEMBL
      F6TDD3
      Conserved Domains (1) summary
      cd06558
      Location:68 → 264
      crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...

    4. XM_023649405.1 → XP_023505173.1  ethylmalonyl-CoA decarboxylase isoform X2

      UniProtKB/TrEMBL
      F6TDD3
      Conserved Domains (1) summary
      cd06558
      Location:49 → 245
      crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...
    Nucleotide Protein
    Heading Accession and Version

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