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    SLC12A2 solute carrier family 12 member 2 [ Equus caballus (horse) ]

    Gene ID: 100073036, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC12A2provided by VGNC
    Official Full Name
    solute carrier family 12 member 2provided by VGNC
    Primary source
    VGNC:VGNC:23020
    See related
    Ensembl:ENSECAG00000013422
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See SLC12A2 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 14 NC_009157.3 (45835463..45939349, complement)

    Chromosome 14 - NC_009157.3Genomic Context describing neighboring genes Neighboring gene solute carrier family 27 member 6 Neighboring gene fibrillin 2 Neighboring gene 60S ribosomal protein L36a-like Neighboring gene uncharacterized LOC102148822 Neighboring gene coiled-coil domain containing 192

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009157.3 Chromosome 14 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ammonium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sodium:potassium:chloride symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ammonium transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell volume homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chloride ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chloride transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in potassium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in potassium ion import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in apical plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    solute carrier family 12 member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009157.3 Reference EquCab3.0 Primary Assembly

      Range
      45835463..45939349 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014730697.2 → XP_014586183.2  solute carrier family 12 member 2 isoform X2

      UniProtKB/TrEMBL
      A0A9L0RD66, F6TEU3
      Related
      ENSECAP00000013160.2, ENSECAT00000016297.3
      Conserved Domains (1) summary
      TIGR00930
      Location:212 → 1192
      2a30; K-Cl cotransporter

    2. XM_005599457.3 → XP_005599514.2  solute carrier family 12 member 2 isoform X1

      UniProtKB/TrEMBL
      A0A9L0RD66, F6VFL4
      Related
      ENSECAP00000013091.3, ENSECAT00000016221.4
      Conserved Domains (1) summary
      TIGR00930
      Location:212 → 1208
      2a30; K-Cl cotransporter
    Nucleotide Protein
    Heading Accession and Version

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