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    MYBBP1A MYB binding protein 1a [ Equus caballus (horse) ]

    Gene ID: 100072728, updated on 8-Mar-2024

    Summary

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    Official Symbol
    MYBBP1Aprovided by VGNC
    Official Full Name
    MYB binding protein 1aprovided by VGNC
    Primary source
    VGNC:VGNC:20461
    See related
    Ensembl:ENSECAG00000024029
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See MYBBP1A in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    103 current EquCab3.0 (GCF_002863925.1) 11 NC_009154.3 (48291515..48307087, complement)
    102 previous assembly EquCab2.0 (GCF_000002305.2) 11 NC_009154.2 (47956681..47971811, complement)

    Chromosome 11 - NC_009154.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102150433 Neighboring gene SPNS lysolipid transporter 3, sphingosine-1-phosphate (putative) Neighboring gene SPNS lysolipid transporter 2, sphingosine-1-phosphate Neighboring gene gamma-glutamyltransferase 6 Neighboring gene smoothelin like 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    myb-binding protein 1A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009154.3 Reference EquCab3.0 Primary Assembly

      Range
      48291515..48307087 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005597680.3 → XP_005597737.1  myb-binding protein 1A

      UniProtKB/TrEMBL
      F6YQZ0
      Related
      ENSECAP00000021710.3, ENSECAT00000026058.3
      Conserved Domains (3) summary
      pfam14757
      Location:1281 → 1365
      NSP2-B_epitope; Immunogenic region of nsp2 protein of arterivirus polyprotein
      pfam04931
      Location:75 → 841
      DNA_pol_phi; DNA polymerase phi
      pfam05104
      Location:1149 → 1342
      Rib_recp_KP_reg; Ribosome receptor lysine/proline rich region
    Nucleotide Protein
    Heading Accession and Version

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