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    DDOST dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit [ Equus caballus (horse) ]

    Gene ID: 100071776, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DDOSTprovided by VGNC
    Official Full Name
    dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunitprovided by VGNC
    Primary source
    VGNC:VGNC:17080
    See related
    Ensembl:ENSECAG00000019546
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See DDOST in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 2 NC_009145.3 (33780104..33788009)

    Chromosome 2 - NC_009145.3Genomic Context describing neighboring genes Neighboring gene SH2 domain containing 5 Neighboring gene kinesin family member 17 Neighboring gene uncharacterized LOC102148467 Neighboring gene PTEN induced kinase 1 Neighboring gene microRNA mir-9060 Neighboring gene uncharacterized LOC111772426 Neighboring gene cytidine deaminase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009145.3 Chromosome 2 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein N-linked glycosylation via asparagine IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of oligosaccharyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009145.3 Reference EquCab3.0 Primary Assembly

      Range
      33780104..33788009
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005607389.3 → XP_005607446.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit

      See identical proteins and their annotated locations for XP_005607446.1

      UniProtKB/TrEMBL
      F7CBX0
      Related
      ENSECAP00000017299.4, ENSECAT00000021027.4
      Conserved Domains (1) summary
      pfam03345
      Location:31 → 438
      DDOST_48kD; Oligosaccharyltransferase 48 kDa subunit beta
    Nucleotide Protein
    Heading Accession and Version

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