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    SRSF10 serine and arginine rich splicing factor 10 [ Equus caballus (horse) ]

    Gene ID: 100071526, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SRSF10provided by VGNC
    Official Full Name
    serine and arginine rich splicing factor 10provided by VGNC
    Primary source
    VGNC:VGNC:58653
    See related
    Ensembl:ENSECAG00000023709
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See SRSF10 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 2 NC_009145.3 (31124866..31137031)

    Chromosome 2 - NC_009145.3Genomic Context describing neighboring genes Neighboring gene myomesin 3 Neighboring gene uncharacterized LOC111772414 Neighboring gene uncharacterized LOC111772415 Neighboring gene RNA transcription, translation and transport factor protein pseudogene Neighboring gene proline rich nuclear receptor coactivator 2 Neighboring gene cannabinoid receptor 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009145.3 Chromosome 2 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nuclear speck IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/arginine-rich splicing factor 10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009145.3 Reference EquCab3.0 Primary Assembly

      Range
      31124866..31137031
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023635510.1 → XP_023491278.1  serine/arginine-rich splicing factor 10 isoform X8

      Conserved Domains (1) summary
      cl17169
      Location:5 → 99
      RRM_SF; RNA recognition motif (RRM) superfamily

    2. XM_023635508.1 → XP_023491276.1  serine/arginine-rich splicing factor 10 isoform X6

      Conserved Domains (1) summary
      cl17169
      Location:10 → 93
      RRM_SF; RNA recognition motif (RRM) superfamily

    3. XM_023635504.1 → XP_023491272.1  serine/arginine-rich splicing factor 10 isoform X2

      Conserved Domains (1) summary
      cl17169
      Location:10 → 93
      RRM_SF; RNA recognition motif (RRM) superfamily

    4. XM_023635506.1 → XP_023491274.1  serine/arginine-rich splicing factor 10 isoform X4

      Conserved Domains (1) summary
      cl17169
      Location:5 → 99
      RRM_SF; RNA recognition motif (RRM) superfamily

    5. XM_023635509.1 → XP_023491277.1  serine/arginine-rich splicing factor 10 isoform X7

      Conserved Domains (1) summary
      cd12559
      Location:5 → 99
      RRM_SRSF10; RNA recognition motif (RRM) found in serine/arginine-rich splicing factor 10 (SRSF10) and similar proteins

    6. XM_023635507.1 → XP_023491275.1  serine/arginine-rich splicing factor 10 isoform X5

      Conserved Domains (1) summary
      cd12312
      Location:10 → 93
      RRM_SRSF10_SRSF12; RNA recognition motif in serine/arginine-rich splicing factor SRSF10, SRSF12 and similar proteins

    7. XM_023635503.1 → XP_023491271.1  serine/arginine-rich splicing factor 10 isoform X1

      Conserved Domains (1) summary
      cl17169
      Location:10 → 93
      RRM_SF; RNA recognition motif (RRM) superfamily

    8. XM_023635505.1 → XP_023491273.1  serine/arginine-rich splicing factor 10 isoform X3

      UniProtKB/TrEMBL
      A0A5F5PYE2
      Related
      ENSECAP00000053536.1, ENSECAT00000072584.2
      Conserved Domains (1) summary
      cd12559
      Location:5 → 99
      RRM_SRSF10; RNA recognition motif (RRM) found in serine/arginine-rich splicing factor 10 (SRSF10) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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