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    NUSAP1 nucleolar and spindle associated protein 1 [ Equus caballus (horse) ]

    Gene ID: 100071174, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NUSAP1provided by VGNC
    Official Full Name
    nucleolar and spindle associated protein 1provided by VGNC
    Primary source
    VGNC:VGNC:20980
    See related
    Ensembl:ENSECAG00000016495
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See NUSAP1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 1 NC_009144.3 (148798107..148827376, complement)

    Chromosome 1 - NC_009144.3Genomic Context describing neighboring genes Neighboring gene RTF1 homolog, Paf1/RNA polymerase II complex component Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor 1 Neighboring gene Opa interacting protein 5 Neighboring gene uncharacterized LOC100630842

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009144.3 Chromosome 1 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in establishment of mitotic spindle localization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic chromosome condensation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cytokinesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitotic spindle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nucleolar and spindle-associated protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009144.3 Reference EquCab3.0 Primary Assembly

      Range
      148798107..148827376 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014733837.2 → XP_014589323.1  nucleolar and spindle-associated protein 1 isoform X6

      UniProtKB/TrEMBL
      A0A9L0S9U3
      Conserved Domains (1) summary
      pfam16006
      Location:151 → 419
      NUSAP; Nucleolar and spindle-associated protein

    2. XM_014733835.2 → XP_014589321.1  nucleolar and spindle-associated protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A3Q2I421, A0A9L0S9U3
      Related
      ENSECAP00000042543.1, ENSECAT00000054105.2
      Conserved Domains (1) summary
      pfam16006
      Location:166 → 434
      NUSAP; Nucleolar and spindle-associated protein

    3. XM_023619700.1 → XP_023475468.1  nucleolar and spindle-associated protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A9L0TNY6
      Conserved Domains (1) summary
      pfam16006
      Location:196 → 439
      NUSAP; Nucleolar and spindle-associated protein

    4. XM_005603130.3 → XP_005603187.1  nucleolar and spindle-associated protein 1 isoform X2

      See identical proteins and their annotated locations for XP_005603187.1

      UniProtKB/TrEMBL
      A0A9L0TNY6
      Conserved Domains (1) summary
      pfam16006
      Location:205 → 473
      NUSAP; Nucleolar and spindle-associated protein

    5. XM_014733833.2 → XP_014589319.1  nucleolar and spindle-associated protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A9L0TNY6
      Related
      ENSECAP00000088062.1, ENSECAT00000082498.1
      Conserved Domains (1) summary
      pfam16006
      Location:220 → 488
      NUSAP; Nucleolar and spindle-associated protein

    6. XM_005603131.3 → XP_005603188.1  nucleolar and spindle-associated protein 1 isoform X3

      See identical proteins and their annotated locations for XP_005603188.1

      UniProtKB/TrEMBL
      A0A9L0TNY6, F6XQL3
      Related
      ENSECAP00000014124.3, ENSECAT00000017388.4
      Conserved Domains (1) summary
      pfam16006
      Location:211 → 454
      NUSAP; Nucleolar and spindle-associated protein
    Nucleotide Protein
    Heading Accession and Version

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