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    NKX2-3 NK2 homeobox 3 [ Equus caballus (horse) ]

    Gene ID: 100070479, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NKX2-3provided by VGNC
    Official Full Name
    NK2 homeobox 3provided by VGNC
    Primary source
    VGNC:VGNC:20755
    See related
    Ensembl:ENSECAG00000000092
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See NKX2-3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 1 NC_009144.3 (30288285..30292056, complement)

    Chromosome 1 - NC_009144.3Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 28 Neighboring gene 40S ribosomal protein S15a pseudogene Neighboring gene 60S ribosomal protein L21 pseudogene Neighboring gene glutamic-oxaloacetic transaminase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009144.3 Chromosome 1 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    homeobox protein Nkx-2.3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009144.3 Reference EquCab3.0 Primary Assembly

      Range
      30288285..30292056 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003363435.3 → XP_003363483.2  homeobox protein Nkx-2.3

      UniProtKB/TrEMBL
      F7D501
      Related
      ENSECAP00000000054.2, ENSECAT00000000074.4
      Conserved Domains (1) summary
      pfam00046
      Location:153 → 206
      Homeobox; Homeobox domain
    Nucleotide Protein
    Heading Accession and Version

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