U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    ST6GALNAC6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 [ Equus caballus (horse) ]

    Gene ID: 100070405, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ST6GALNAC6provided by VGNC
    Official Full Name
    ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6provided by VGNC
    Primary source
    VGNC:VGNC:23638
    See related
    Ensembl:ENSECAG00000012040
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ST6GALNAC6 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 25 NC_009168.3 (31856337..31874625, complement)

    Chromosome 25 - NC_009168.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106782598 Neighboring gene uncharacterized LOC111770601 Neighboring gene adenylate kinase 1 Neighboring gene ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 Neighboring gene phosphatidylinositol-4-phosphate 5-kinase like 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_009168.3 Chromosome 25 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ganglioside biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in oligosaccharide metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009168.3 Reference EquCab3.0 Primary Assembly

      Range
      31856337..31874625 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023628965.1 → XP_023484733.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X1

      UniProtKB/TrEMBL
      A0A9L0R0K2, A0A9L0SCM7
      Related
      ENSECAP00000057593.1, ENSECAT00000111804.1
      Conserved Domains (1) summary
      pfam00777
      Location:62 → 253
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    2. XM_023628968.1 → XP_023484736.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X1

      UniProtKB/TrEMBL
      A0A9L0R0K2, A0A9L0SCM7
      Related
      ENSECAP00000065295.1, ENSECAT00000092647.1
      Conserved Domains (1) summary
      pfam00777
      Location:62 → 253
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    3. XM_005605806.3 → XP_005605863.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X1

      See identical proteins and their annotated locations for XP_005605863.1

      UniProtKB/TrEMBL
      A0A9L0R0K2, A0A9L0SCM7
      Related
      ENSECAP00000071765.1, ENSECAT00000092289.1
      Conserved Domains (1) summary
      pfam00777
      Location:62 → 253
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    4. XM_023628960.1 → XP_023484728.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X1

      UniProtKB/TrEMBL
      A0A9L0R0K2, A0A9L0SCM7
      Conserved Domains (1) summary
      pfam00777
      Location:62 → 253
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    5. XM_023628966.1 → XP_023484734.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X1

      UniProtKB/TrEMBL
      A0A9L0R0K2, A0A9L0SCM7
      Conserved Domains (1) summary
      pfam00777
      Location:62 → 253
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    6. XM_023628963.1 → XP_023484731.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X3

      UniProtKB/TrEMBL
      A0A9L0T2W8, A0A9L0TRP3
      Conserved Domains (1) summary
      pfam00777
      Location:96 → 287
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    7. XM_023628961.1 → XP_023484729.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X2

      UniProtKB/TrEMBL
      A0A9L0TRP3, F6T6E1
      Related
      ENSECAP00000009968.4, ENSECAT00000012617.4
      Conserved Domains (1) summary
      pfam00777
      Location:116 → 307
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    8. XM_023628962.1 → XP_023484730.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X3

      UniProtKB/TrEMBL
      A0A9L0T2W8, A0A9L0TRP3
      Related
      ENSECAP00000080611.1, ENSECAT00000115385.1
      Conserved Domains (1) summary
      pfam00777
      Location:96 → 287
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    9. XM_023628964.1 → XP_023484732.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X1

      UniProtKB/TrEMBL
      A0A9L0R0K2, A0A9L0SCM7
      Related
      ENSECAP00000089337.1, ENSECAT00000143902.1
      Conserved Domains (1) summary
      pfam00777
      Location:62 → 253
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    10. XM_005605805.2 → XP_005605862.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X1

      See identical proteins and their annotated locations for XP_005605862.1

      UniProtKB/TrEMBL
      A0A9L0R0K2, A0A9L0SCM7
      Conserved Domains (1) summary
      pfam00777
      Location:62 → 253
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    11. XM_023628969.1 → XP_023484737.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X4

      Conserved Domains (1) summary
      pfam00777
      Location:96 → 266
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.