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    CMTR2 cap methyltransferase 2 [ Equus caballus (horse) ]

    Gene ID: 100068485, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CMTR2provided by VGNC
    Official Full Name
    cap methyltransferase 2provided by VGNC
    Primary source
    VGNC:VGNC:16656
    See related
    Ensembl:ENSECAG00000006573
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See CMTR2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 3 NC_009146.3 (23221935..23229352)

    Chromosome 3 - NC_009146.3Genomic Context describing neighboring genes Neighboring gene microRNA mir-9079 Neighboring gene calbindin 2 Neighboring gene HYDIN axonemal central pair apparatus protein Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene VAC14 component of PIKFYVE complex

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009146.3 Chromosome 3 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA (nucleoside-2'-O-)-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in 7-methylguanosine mRNA capping IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009146.3 Reference EquCab3.0 Primary Assembly

      Range
      23221935..23229352
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005608416.3 → XP_005608473.1  cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2

      See identical proteins and their annotated locations for XP_005608473.1

      UniProtKB/TrEMBL
      F7B0Y2
      Related
      ENSECAP00000082788.1, ENSECAT00000129285.1
      Conserved Domains (1) summary
      pfam01728
      Location:112 → 318
      FtsJ; FtsJ-like methyltransferase

    2. XM_005608415.3 → XP_005608472.1  cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2

      See identical proteins and their annotated locations for XP_005608472.1

      UniProtKB/TrEMBL
      F7B0Y2
      Related
      ENSECAP00000004667.1, ENSECAT00000006559.3
      Conserved Domains (1) summary
      pfam01728
      Location:112 → 318
      FtsJ; FtsJ-like methyltransferase
    Nucleotide Protein
    Heading Accession and Version

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