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    KCNQ4 potassium voltage-gated channel subfamily Q member 4 [ Equus caballus (horse) ]

    Gene ID: 100067963, updated on 17-Aug-2024

    Summary

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    Official Symbol
    KCNQ4provided by VGNC
    Official Full Name
    potassium voltage-gated channel subfamily Q member 4provided by VGNC
    Primary source
    VGNC:VGNC:58633
    See related
    Ensembl:ENSECAG00000021257
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See KCNQ4 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 2 NC_009145.3 (17404084..17456796, complement)

    Chromosome 2 - NC_009145.3Genomic Context describing neighboring genes Neighboring gene schlafen like 1 Neighboring gene CTP synthase 1 Neighboring gene Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 Neighboring gene uncharacterized LOC111771286 Neighboring gene nuclear transcription factor Y subunit gamma Neighboring gene microRNA mir-30c

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009145.3 Chromosome 2 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables voltage-gated potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in potassium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of voltage-gated potassium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    potassium voltage-gated channel subfamily KQT member 4
    Names
    potassium voltage-gated channel, KQT-like subfamily, member 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009145.3 Reference EquCab3.0 Primary Assembly

      Range
      17404084..17456796 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023632430.1 → XP_023488198.1  potassium voltage-gated channel subfamily KQT member 4 isoform X2

      UniProtKB/TrEMBL
      A0A3Q2H524, F6U439
      Related
      ENSECAP00000028854.1, ENSECAT00000061754.3
      Conserved Domains (2) summary
      pfam00520
      Location:98 → 330
      Ion_trans; Ion transport protein
      pfam03520
      Location:468 → 646
      KCNQ_channel; KCNQ voltage-gated potassium channel

    2. XM_023632423.1 → XP_023488191.1  potassium voltage-gated channel subfamily KQT member 4 isoform X1

      UniProtKB/TrEMBL
      F6U439
      Conserved Domains (3) summary
      pfam00520
      Location:98 → 330
      Ion_trans; Ion transport protein
      pfam03520
      Location:468 → 625
      KCNQ_channel; KCNQ voltage-gated potassium channel
      cl26464
      Location:657 → 710
      Atrophin-1; Atrophin-1 family

    RNA

    1. XR_002805019.1 RNA Sequence

    2. XR_002805020.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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    Research Materials