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    CCR7 C-C motif chemokine receptor 7 [ Equus caballus (horse) ]

    Gene ID: 100067673, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CCR7provided by VGNC
    Official Full Name
    C-C motif chemokine receptor 7provided by VGNC
    Primary source
    VGNC:VGNC:16229
    See related
    Ensembl:ENSECAG00000004945
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See CCR7 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 11 NC_009154.3 (22114675..22126350)

    Chromosome 11 - NC_009154.3Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene keratin 222 Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 Neighboring gene uncharacterized LOC102149228 Neighboring gene tensin 4 Neighboring gene insulin like growth factor binding protein 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009154.3 Chromosome 11 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables C-C motif chemokine 19 receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables chemokine (C-C motif) ligand 19 binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables chemokine (C-C motif) ligand 21 binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in calcium-mediated signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in inflammatory response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cytosolic calcium ion concentration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in external side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-C chemokine receptor type 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009154.3 Reference EquCab3.0 Primary Assembly

      Range
      22114675..22126350
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001500181.5 → XP_001500231.1  C-C chemokine receptor type 7

      See identical proteins and their annotated locations for XP_001500231.1

      UniProtKB/TrEMBL
      A0A9L0TDE6, F6SPH5
      Related
      ENSECAP00000003375.3, ENSECAT00000004847.4
      Conserved Domains (1) summary
      pfam00001
      Location:75 → 327
      7tm_1; 7 transmembrane receptor (rhodopsin family)
    Nucleotide Protein
    Heading Accession and Version

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