U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    MTO1 mitochondrial tRNA translation optimization 1 [ Equus caballus (horse) ]

    Gene ID: 100065059, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    MTO1provided by VGNC
    Official Full Name
    mitochondrial tRNA translation optimization 1provided by VGNC
    Primary source
    VGNC:VGNC:20433
    See related
    Ensembl:ENSECAG00000019823
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See MTO1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 10 NC_009153.3 (28883202..28911068)

    Chromosome 10 - NC_009153.3Genomic Context describing neighboring genes Neighboring gene DEAD-box helicase 43 Neighboring gene cyclic GMP-AMP synthase Neighboring gene uncharacterized LOC106782172 Neighboring gene U6 spliceosomal RNA Neighboring gene eukaryotic translation elongation factor 1 alpha 1 Neighboring gene microRNA 703 Neighboring gene solute carrier family 17 member 5

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_009153.3 Chromosome 10 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial tRNA wobble uridine modification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tRNA methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein MTO1 homolog, mitochondrial

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009153.3 Reference EquCab3.0 Primary Assembly

      Range
      28883202..28911068
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023650652.1 → XP_023506420.1  protein MTO1 homolog, mitochondrial

      UniProtKB/TrEMBL
      A0A9L0TCF0, F7CC48
      Related
      ENSECAP00000085956.1, ENSECAT00000111466.1
      Conserved Domains (1) summary
      PRK05192
      Location:57 → 670
      PRK05192; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Validated

    RNA

    1. XR_002810819.1 RNA Sequence

    2. XR_002810820.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials