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    XRRA1 X-ray radiation resistance associated 1 [ Equus caballus (horse) ]

    Gene ID: 100064954, updated on 17-Aug-2024

    Summary

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    Official Symbol
    XRRA1provided by VGNC
    Official Full Name
    X-ray radiation resistance associated 1provided by VGNC
    Primary source
    VGNC:VGNC:25087
    See related
    Ensembl:ENSECAG00000007758
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See XRRA1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 7 NC_009150.3 (71281599..71340371)

    Chromosome 7 - NC_009150.3Genomic Context describing neighboring genes Neighboring gene neuraminidase 3 Neighboring gene signal peptidase complex subunit 2 Neighboring gene ring finger protein 169 Neighboring gene uncharacterized LOC106783447 Neighboring gene chordin like 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009150.3 Chromosome 7 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    X-ray radiation resistance-associated protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009150.3 Reference EquCab3.0 Primary Assembly

      Range
      71281599..71340371
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023645717.1 → XP_023501485.1  X-ray radiation resistance-associated protein 1 isoform X2

      UniProtKB/TrEMBL
      F6WFD3
      Conserved Domains (2) summary
      sd00031
      Location:150 → 192
      LRR_1; leucine-rich repeat [structural motif]
      pfam13855
      Location:191 → 269
      LRR_8; Leucine rich repeat

    2. XM_023645720.1 → XP_023501488.1  X-ray radiation resistance-associated protein 1 isoform X7

      UniProtKB/TrEMBL
      F6WFD3
      Conserved Domains (2) summary
      sd00031
      Location:105 → 128
      LRR_1; leucine-rich repeat [structural motif]
      pfam13855
      Location:148 → 232
      LRR_8; Leucine rich repeat

    3. XM_005612042.3 → XP_005612099.1  X-ray radiation resistance-associated protein 1 isoform X1

      See identical proteins and their annotated locations for XP_005612099.1

      UniProtKB/TrEMBL
      F6WFD3
      Conserved Domains (4) summary
      cd00116
      Location:142 → 273
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:150 → 172
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:171 → 212
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:195 → 273
      LRR_8; Leucine rich repeat

    4. XM_005612040.3 → XP_005612097.1  X-ray radiation resistance-associated protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A9L0RJP4, F6WFD3
      Related
      ENSECAP00000064150.1, ENSECAT00000099299.1
      Conserved Domains (4) summary
      cd00116
      Location:142 → 273
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:150 → 172
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:171 → 212
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:195 → 273
      LRR_8; Leucine rich repeat

    5. XM_014741748.2 → XP_014597234.1  X-ray radiation resistance-associated protein 1 isoform X3

      UniProtKB/TrEMBL
      F6WFD3
      Conserved Domains (4) summary
      cd00116
      Location:142 → 273
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:150 → 172
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:171 → 212
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:195 → 273
      LRR_8; Leucine rich repeat

    6. XM_005612041.3 → XP_005612098.1  X-ray radiation resistance-associated protein 1 isoform X6

      UniProtKB/TrEMBL
      F6WFD3
      Conserved Domains (4) summary
      cd00116
      Location:142 → 273
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:150 → 172
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:171 → 212
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:195 → 273
      LRR_8; Leucine rich repeat

    7. XM_023645719.1 → XP_023501487.1  X-ray radiation resistance-associated protein 1 isoform X5

      UniProtKB/TrEMBL
      F6WFD3
      Conserved Domains (2) summary
      COG4886
      Location:127 → 279
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:150 → 172
      LRR_RI; leucine-rich repeat [structural motif]

    8. XM_023645721.1 → XP_023501489.1  X-ray radiation resistance-associated protein 1 isoform X8

      UniProtKB/TrEMBL
      F6WFD3
      Conserved Domains (2) summary
      COG4886
      Location:127 → 279
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:150 → 172
      LRR_RI; leucine-rich repeat [structural motif]

    9. XM_023645722.1 → XP_023501490.1  X-ray radiation resistance-associated protein 1 isoform X9

      UniProtKB/TrEMBL
      F6WFD3
      Conserved Domains (2) summary
      COG4886
      Location:127 → 279
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:150 → 172
      LRR_RI; leucine-rich repeat [structural motif]

    10. XM_005612038.3 → XP_005612095.1  X-ray radiation resistance-associated protein 1 isoform X1

      See identical proteins and their annotated locations for XP_005612095.1

      UniProtKB/TrEMBL
      F6WFD3
      Conserved Domains (4) summary
      cd00116
      Location:142 → 273
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:150 → 172
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:171 → 212
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:195 → 273
      LRR_8; Leucine rich repeat

    11. XM_023645723.1 → XP_023501491.1  X-ray radiation resistance-associated protein 1 isoform X10

      UniProtKB/TrEMBL
      A0A3Q2IDQ8
      Related
      ENSECAP00000043932.2, ENSECAT00000051416.3
      Conserved Domains (2) summary
      sd00033
      Location:23 → 54
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:21 → 99
      LRR_8; Leucine rich repeat
    Nucleotide Protein
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