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    CHMP2A charged multivesicular body protein 2A [ Equus caballus (horse) ]

    Gene ID: 100064860, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CHMP2Aprovided by VGNC
    Official Full Name
    charged multivesicular body protein 2Aprovided by VGNC
    Primary source
    VGNC:VGNC:16505
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See CHMP2A in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 10 NC_009153.3 (28628188..28631660, complement)

    Chromosome 10 - NC_009153.3Genomic Context describing neighboring genes Neighboring gene solute carrier family 27 member 5 Neighboring gene zinc finger and BTB domain containing 45 Neighboring gene tripartite motif containing 28 Neighboring gene ubiquitin conjugating enzyme E2 M Neighboring gene uncharacterized LOC111775471 Neighboring gene myeloid zinc finger 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009153.3 Chromosome 10 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in endosome transport via multivesicular body sorting pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in late endosome to vacuole transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ESCRT III complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in multivesicular body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    charged multivesicular body protein 2a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009153.3 Reference EquCab3.0 Primary Assembly

      Range
      28628188..28631660 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023651554.1 → XP_023507322.1  charged multivesicular body protein 2a isoform X1

      Conserved Domains (1) summary
      pfam03357
      Location:17 → 185
      Snf7

    2. XM_023651553.1 → XP_023507321.1  charged multivesicular body protein 2a isoform X1

      Conserved Domains (1) summary
      pfam03357
      Location:17 → 185
      Snf7

    3. XM_023651555.1 → XP_023507323.1  charged multivesicular body protein 2a isoform X2

    Nucleotide Protein
    Heading Accession and Version

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    Research Materials