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    GDPD5 glycerophosphodiester phosphodiesterase domain containing 5 [ Equus caballus (horse) ]

    Gene ID: 100064592, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GDPD5provided by VGNC
    Official Full Name
    glycerophosphodiester phosphodiesterase domain containing 5provided by VGNC
    Primary source
    VGNC:VGNC:18299
    See related
    Ensembl:ENSECAG00000010098
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See GDPD5 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 7 NC_009150.3 (70827848..70913604)

    Chromosome 7 - NC_009150.3Genomic Context describing neighboring genes Neighboring gene microtubule associated protein 6 Neighboring gene serpin family H member 1 Neighboring gene kelch like family member 35 Neighboring gene small nucleolar RNA SNORD15 Neighboring gene ribosomal protein S3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009150.3 Chromosome 7 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glycerophosphodiester phosphodiesterase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of neuron differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycerophosphodiester phosphodiesterase domain containing 5; glycerophosphodiester phosphodiesterase domain-containing protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009150.3 Reference EquCab3.0 Primary Assembly

      Range
      70827848..70913604
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023645705.1 → XP_023501473.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X3

      Conserved Domains (1) summary
      cl14615
      Location:227 → 534
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    2. XM_023645706.1 → XP_023501474.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X4

      Conserved Domains (1) summary
      cl14615
      Location:227 → 534
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    3. XM_023645700.1 → XP_023501468.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      F6S1U5
      Conserved Domains (1) summary
      cl14615
      Location:227 → 623
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    4. XM_023645703.1 → XP_023501471.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      F6S1U5
      Conserved Domains (1) summary
      cl14615
      Location:227 → 623
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    5. XM_023645704.1 → XP_023501472.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X2

      UniProtKB/TrEMBL
      A0A9L0T2V0, F6S1U5
      Related
      ENSECAP00000081510.1, ENSECAT00000095961.1
      Conserved Domains (1) summary
      cl14615
      Location:227 → 618
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    6. XM_023645707.1 → XP_023501475.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X5

      UniProtKB/TrEMBL
      A0A3Q2H0F2, F6S1U5
      Related
      ENSECAP00000026441.1, ENSECAT00000041383.3
      Conserved Domains (1) summary
      cl14615
      Location:227 → 581
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    7. XM_023645708.1 → XP_023501476.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X6

      UniProtKB/TrEMBL
      F6S1U5
      Related
      ENSECAP00000078633.1, ENSECAT00000117446.1
      Conserved Domains (1) summary
      cl14615
      Location:227 → 576
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    8. XM_023645702.1 → XP_023501470.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      F6S1U5
      Conserved Domains (1) summary
      cl14615
      Location:227 → 623
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

    9. XM_023645701.1 → XP_023501469.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      F6S1U5
      Conserved Domains (1) summary
      cl14615
      Location:227 → 623
      PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily
    Nucleotide Protein
    Heading Accession and Version

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