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    GPAA1 glycosylphosphatidylinositol anchor attachment 1 [ Equus caballus (horse) ]

    Gene ID: 100063382, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GPAA1provided by VGNC
    Official Full Name
    glycosylphosphatidylinositol anchor attachment 1provided by VGNC
    Primary source
    VGNC:VGNC:18469
    See related
    Ensembl:ENSECAG00000013668
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See GPAA1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 9 NC_009152.3 (84860947..84864396)

    Chromosome 9 - NC_009152.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111775067 Neighboring gene uncharacterized LOC106781017 Neighboring gene exosome component 4 Neighboring gene cytochrome c1 Neighboring gene SHANK associated RH domain interactor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009152.3 Chromosome 9 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in attachment of GPI anchor to protein IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of GPI-anchor transamidase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycosylphosphatidylinositol anchor attachment 1 protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009152.3 Reference EquCab3.0 Primary Assembly

      Range
      84860947..84864396
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023649258.1 → XP_023505026.1  glycosylphosphatidylinositol anchor attachment 1 protein

      UniProtKB/TrEMBL
      F7AQ37
      Related
      ENSECAP00000011547.3, ENSECAT00000014440.3
      Conserved Domains (1) summary
      pfam04114
      Location:126 → 613
      Gaa1; Gaa1-like, GPI transamidase component
    Nucleotide Protein
    Heading Accession and Version

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