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    CIAO1 cytosolic iron-sulfur assembly component 1 [ Equus caballus (horse) ]

    Gene ID: 100062424, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CIAO1provided by VGNC
    Official Full Name
    cytosolic iron-sulfur assembly component 1provided by VGNC
    Primary source
    VGNC:VGNC:16542
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See CIAO1 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 15 NC_009158.3 (12494433..12499479, complement)

    Chromosome 15 - NC_009158.3Genomic Context describing neighboring genes Neighboring gene ITPRIP like 1 Neighboring gene small nuclear ribonucleoprotein U5 subunit 200 Neighboring gene transmembrane protein 127 Neighboring gene StAR related lipid transfer domain containing 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009158.3 Chromosome 15 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in iron-sulfur cluster assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic [4Fe-4S] assembly targeting complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable cytosolic iron-sulfur protein assembly protein CIAO1
    Names
    cytosolic iron-sulfur protein assembly 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009158.3 Reference EquCab3.0 Primary Assembly

      Range
      12494433..12499479 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001492911.5 → XP_001492961.1  probable cytosolic iron-sulfur protein assembly protein CIAO1

      UniProtKB/TrEMBL
      F7C741
      Conserved Domains (3) summary
      COG2319
      Location:22 → 334
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:17 → 332
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:19 → 58
      7WD40; WD40 repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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