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    SLC38A3 solute carrier family 38 member 3 [ Equus caballus (horse) ]

    Gene ID: 100062146, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC38A3provided by VGNC
    Official Full Name
    solute carrier family 38 member 3provided by VGNC
    Primary source
    VGNC:VGNC:23192
    See related
    Ensembl:ENSECAG00000010900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See SLC38A3 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 16 NC_009159.3 (38580563..38597209, complement)

    Chromosome 16 - NC_009159.3Genomic Context describing neighboring genes Neighboring gene semaphorin 3B Neighboring gene G protein subunit alpha i2 Neighboring gene uncharacterized LOC111768332 Neighboring gene G protein subunit alpha transducin 1 Neighboring gene semaphorin 3F

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009159.3 Chromosome 16 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-asparagine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables L-glutamine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables L-histidine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in amino acid transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in asparagine transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glutamine transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in histidine transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium-coupled neutral amino acid transporter 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009159.3 Reference EquCab3.0 Primary Assembly

      Range
      38580563..38597209 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014731664.2 → XP_014587150.1  sodium-coupled neutral amino acid transporter 3 isoform X1

      UniProtKB/TrEMBL
      A0A9L0RTQ9, A0A9L0SI27
      Related
      ENSECAP00000067210.1, ENSECAT00000099651.1
      Conserved Domains (2) summary
      COG0814
      Location:95 → 516
      SdaC; Amino acid permease [Amino acid transport and metabolism]
      pfam01490
      Location:95 → 521
      Aa_trans; Transmembrane amino acid transporter protein

    2. XM_001493826.5 → XP_001493876.2  sodium-coupled neutral amino acid transporter 3 isoform X2

      See identical proteins and their annotated locations for XP_001493876.2

      UniProtKB/TrEMBL
      A0A9L0SI27
      Related
      ENSECAP00000009143.3, ENSECAT00000011668.3
      Conserved Domains (2) summary
      COG0814
      Location:64 → 485
      SdaC; Amino acid permease [Amino acid transport and metabolism]
      cl00456
      Location:64 → 490
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    3. XM_014731665.2 → XP_014587151.1  sodium-coupled neutral amino acid transporter 3 isoform X2

      UniProtKB/TrEMBL
      A0A9L0SI27
      Related
      ENSECAP00000057391.1, ENSECAT00000124215.1
      Conserved Domains (2) summary
      COG0814
      Location:64 → 485
      SdaC; Amino acid permease [Amino acid transport and metabolism]
      cl00456
      Location:64 → 490
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    4. XM_014731666.2 → XP_014587152.1  sodium-coupled neutral amino acid transporter 3 isoform X2

      UniProtKB/TrEMBL
      A0A9L0SI27
      Related
      ENSECAP00000074522.1, ENSECAT00000116388.1
      Conserved Domains (2) summary
      COG0814
      Location:64 → 485
      SdaC; Amino acid permease [Amino acid transport and metabolism]
      cl00456
      Location:64 → 490
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
    Nucleotide Protein
    Heading Accession and Version

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