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    WDR13 WD repeat domain 13 [ Equus caballus (horse) ]

    Gene ID: 100062003, updated on 17-Aug-2024

    Summary

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    Official Symbol
    WDR13provided by VGNC
    Official Full Name
    WD repeat domain 13provided by VGNC
    Primary source
    VGNC:VGNC:58272
    See related
    Ensembl:ENSECAG00000010542
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See WDR13 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) X NC_009175.3 (40586803..40593561)

    Chromosome X - NC_009175.3Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 25 Neighboring gene RNA binding motif protein 3 Neighboring gene uncharacterized LOC111771658 Neighboring gene WASP actin nucleation promoting factor Neighboring gene SUV39H1 histone lysine methyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009175.3 Chromosome X Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables promoter-specific chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    WD repeat-containing protein 13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009175.3 Reference EquCab3.0 Primary Assembly

      Range
      40586803..40593561
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023633258.1 → XP_023489026.1  WD repeat-containing protein 13 isoform X2

      UniProtKB/TrEMBL
      A0A9L0RLU7
      Conserved Domains (2) summary
      sd00039
      Location:129 → 165
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:83 → 389
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    2. XM_023633251.1 → XP_023489019.1  WD repeat-containing protein 13 isoform X1

      UniProtKB/TrEMBL
      A0A9L0RLU7, F6SFV9
      Related
      ENSECAP00000008468.2, ENSECAT00000010909.3
      Conserved Domains (2) summary
      sd00039
      Location:221 → 257
      7WD40; WD40 repeat [structural motif]
      cl25539
      Location:175 → 481
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    3. XM_023633252.1 → XP_023489020.1  WD repeat-containing protein 13 isoform X1

      UniProtKB/TrEMBL
      A0A9L0RLU7, F6SFV9
      Conserved Domains (2) summary
      sd00039
      Location:221 → 257
      7WD40; WD40 repeat [structural motif]
      cl25539
      Location:175 → 481
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    4. XM_023633256.1 → XP_023489024.1  WD repeat-containing protein 13 isoform X2

      UniProtKB/TrEMBL
      A0A9L0RLU7
      Conserved Domains (2) summary
      sd00039
      Location:129 → 165
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:83 → 389
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    5. XM_023633257.1 → XP_023489025.1  WD repeat-containing protein 13 isoform X2

      UniProtKB/TrEMBL
      A0A9L0RLU7
      Conserved Domains (2) summary
      sd00039
      Location:129 → 165
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:83 → 389
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    6. XM_023633260.1 → XP_023489028.1  WD repeat-containing protein 13 isoform X2

      UniProtKB/TrEMBL
      A0A9L0RLU7
      Conserved Domains (2) summary
      sd00039
      Location:129 → 165
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:83 → 389
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    7. XM_023633253.1 → XP_023489021.1  WD repeat-containing protein 13 isoform X2

      UniProtKB/TrEMBL
      A0A9L0RLU7
      Conserved Domains (2) summary
      sd00039
      Location:129 → 165
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:83 → 389
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    8. XM_023633254.1 → XP_023489022.1  WD repeat-containing protein 13 isoform X2

      UniProtKB/TrEMBL
      A0A9L0RLU7
      Conserved Domains (2) summary
      sd00039
      Location:129 → 165
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:83 → 389
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    9. XM_023633255.1 → XP_023489023.1  WD repeat-containing protein 13 isoform X2

      UniProtKB/TrEMBL
      A0A9L0RLU7
      Conserved Domains (2) summary
      sd00039
      Location:129 → 165
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:83 → 389
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

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