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    SPATA7 spermatogenesis associated 7 [ Equus caballus (horse) ]

    Gene ID: 100061948, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SPATA7provided by VGNC
    Official Full Name
    spermatogenesis associated 7provided by VGNC
    Primary source
    VGNC:VGNC:23498
    See related
    Ensembl:ENSECAG00000010675
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See SPATA7 in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 24 NC_009167.3 (32147030..32179112)

    Chromosome 24 - NC_009167.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111770376 Neighboring gene potassium two pore domain channel subfamily K member 10 Neighboring gene ragulator complex protein LAMTOR2 pseudogene Neighboring gene protein tyrosine phosphatase non-receptor type 21 Neighboring gene zinc finger CCCH-type containing 14

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009167.3 Chromosome 24 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in microtubule cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in photoreceptor cell maintenance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to photoreceptor connecting cilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to photoreceptor outer segment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axoneme IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ciliary basal body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in photoreceptor distal connecting cilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in rod photoreceptor outer segment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    spermatogenesis-associated protein 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009167.3 Reference EquCab3.0 Primary Assembly

      Range
      32147030..32179112
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023628224.1 → XP_023483992.1  spermatogenesis-associated protein 7 isoform X1

      UniProtKB/TrEMBL
      A0A9L0RXW0, F6T1A9
      Related
      ENSECAP00000008675.2, ENSECAT00000011137.3
      Conserved Domains (1) summary
      pfam15244
      Location:10 → 401
      HSD3; Spermatogenesis-associated protein 7, or HSD3

    2. XM_023628225.1 → XP_023483993.1  spermatogenesis-associated protein 7 isoform X2

      UniProtKB/TrEMBL
      A0A9L0RXW0
      Conserved Domains (1) summary
      pfam15244
      Location:10 → 369
      HSD3; Spermatogenesis-associated protein 7, or HSD3

    3. XM_023628226.1 → XP_023483994.1  spermatogenesis-associated protein 7 isoform X3

      UniProtKB/TrEMBL
      A0A9L0RXW0
      Conserved Domains (1) summary
      pfam15244
      Location:1 → 328
      HSD3; Spermatogenesis-associated protein 7, or HSD3
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials