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    NECAP1 NECAP endocytosis associated 1 [ Equus caballus (horse) ]

    Gene ID: 100060780, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NECAP1provided by VGNC
    Official Full Name
    NECAP endocytosis associated 1provided by VGNC
    Primary source
    VGNC:VGNC:20654
    See related
    Ensembl:ENSECAG00000012978
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See NECAP1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 6 NC_009149.3 (36380226..36391934, complement)

    Chromosome 6 - NC_009149.3Genomic Context describing neighboring genes Neighboring gene C-type lectin domain containing 6A Neighboring gene C-type lectin domain family 4 member A Neighboring gene complement C3a receptor 1 Neighboring gene forkhead box J2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009149.3 Chromosome 6 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of clathrin vesicle coat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    adaptin ear-binding coat-associated protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009149.3 Reference EquCab3.0 Primary Assembly

      Range
      36380226..36391934 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001498661.4 → XP_001498711.1  adaptin ear-binding coat-associated protein 1

      See identical proteins and their annotated locations for XP_001498711.1

      UniProtKB/TrEMBL
      A0A9L0R7C5, F6QUQ3
      Related
      ENSECAP00000059946.1, ENSECAT00000099436.1
      Conserved Domains (1) summary
      pfam07933
      Location:7 → 164
      DUF1681; Protein of unknown function (DUF1681)
    Nucleotide Protein
    Heading Accession and Version

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