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    FIP1L1 factor interacting with PAPOLA and CPSF1 [ Equus caballus (horse) ]

    Gene ID: 100060154, updated on 17-Aug-2024

    Summary

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    Official Symbol
    FIP1L1provided by VGNC
    Official Full Name
    factor interacting with PAPOLA and CPSF1provided by VGNC
    Primary source
    VGNC:VGNC:18045
    See related
    Ensembl:ENSECAG00000019415
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See FIP1L1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 3 NC_009146.3 (80596467..80668313, complement)

    Chromosome 3 - NC_009146.3Genomic Context describing neighboring genes Neighboring gene chromobox protein homolog 1 pseudogene Neighboring gene ligand of numb-protein X 1 Neighboring gene sec1 family domain containing 2 Neighboring gene RAS like family 11 member B

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009146.3 Chromosome 3 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    part_of mRNA cleavage and polyadenylation specificity factor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pre-mRNA 3'-end-processing factor FIP1
    Names
    FIP1 like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009146.3 Reference EquCab3.0 Primary Assembly

      Range
      80596467..80668313 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023638095.1 → XP_023493863.1  pre-mRNA 3'-end-processing factor FIP1 isoform X8

      UniProtKB/TrEMBL
      A0A3Q2H0M6, A0A3Q2LS35
      Related
      ENSECAP00000026959.2, ENSECAT00000057145.2
      Conserved Domains (1) summary
      pfam05182
      Location:155 → 196
      Fip1; Fip1 motif

    2. XM_023638094.1 → XP_023493862.1  pre-mRNA 3'-end-processing factor FIP1 isoform X7

      UniProtKB/TrEMBL
      A0A3Q2LS35
      Conserved Domains (1) summary
      pfam05182
      Location:155 → 196
      Fip1; Fip1 motif

    3. XM_023638091.1 → XP_023493859.1  pre-mRNA 3'-end-processing factor FIP1 isoform X4

      UniProtKB/TrEMBL
      A0A3Q2HFZ9, A0A3Q2LS35
      Related
      ENSECAP00000033477.1, ENSECAT00000055339.3
      Conserved Domains (1) summary
      pfam05182
      Location:155 → 196
      Fip1; Fip1 motif

    4. XM_023638092.1 → XP_023493860.1  pre-mRNA 3'-end-processing factor FIP1 isoform X5

      UniProtKB/TrEMBL
      A0A3Q2LS35
      Related
      ENSECAP00000045323.2, ENSECAT00000038184.2
      Conserved Domains (1) summary
      pfam05182
      Location:155 → 196
      Fip1; Fip1 motif

    5. XM_023638089.1 → XP_023493857.1  pre-mRNA 3'-end-processing factor FIP1 isoform X2

      UniProtKB/TrEMBL
      A0A3Q2LS35, F7DYB4
      Related
      ENSECAP00000017077.2, ENSECAT00000020783.3
      Conserved Domains (1) summary
      pfam05182
      Location:155 → 196
      Fip1; Fip1 motif

    6. XM_014738642.2 → XP_014594128.2  pre-mRNA 3'-end-processing factor FIP1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q2LS35
      Conserved Domains (1) summary
      pfam05182
      Location:155 → 196
      Fip1; Fip1 motif

    7. XM_023638090.1 → XP_023493858.1  pre-mRNA 3'-end-processing factor FIP1 isoform X3

      UniProtKB/TrEMBL
      A0A3Q2LKH1
      Conserved Domains (1) summary
      pfam05182
      Location:140 → 181
      Fip1; Fip1 motif

    8. XM_023638093.1 → XP_023493861.1  pre-mRNA 3'-end-processing factor FIP1 isoform X6

      UniProtKB/TrEMBL
      A0A3Q2LKH1
      Conserved Domains (1) summary
      pfam05182
      Location:140 → 181
      Fip1; Fip1 motif

    9. XM_023638096.1 → XP_023493864.1  pre-mRNA 3'-end-processing factor FIP1 isoform X9

      UniProtKB/TrEMBL
      A0A3Q2LKH1
      Related
      ENSECAP00000041925.2, ENSECAT00000059265.3
      Conserved Domains (1) summary
      pfam05182
      Location:140 → 181
      Fip1; Fip1 motif
    Nucleotide Protein
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