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    CNOT8 CCR4-NOT transcription complex subunit 8 [ Equus caballus (horse) ]

    Gene ID: 100059963, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CNOT8provided by VGNC
    Official Full Name
    CCR4-NOT transcription complex subunit 8provided by VGNC
    Primary source
    VGNC:VGNC:16681
    See related
    Ensembl:ENSECAG00000013294
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See CNOT8 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 14 NC_009157.3 (23016039..23030490, complement)

    Chromosome 14 - NC_009157.3Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L22 Neighboring gene gem nuclear organelle associated protein 5 Neighboring gene fatty acid hydroxylase domain containing 2 Neighboring gene La ribonucleoprotein 1, translational regulator Neighboring gene uncharacterized LOC111767752

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009157.3 Chromosome 14 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables poly(A)-specific ribonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of CCR4-NOT complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of CCR4-NOT core complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in P-body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CCR4-NOT transcription complex subunit 8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009157.3 Reference EquCab3.0 Primary Assembly

      Range
      23016039..23030490 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023617363.1 → XP_023473131.1  CCR4-NOT transcription complex subunit 8 isoform X1

      UniProtKB/TrEMBL
      A0A9L0R189
      Conserved Domains (1) summary
      cl23804
      Location:1 → 263
      CAF1; CAF1 family ribonuclease

    2. XM_023617361.1 → XP_023473129.1  CCR4-NOT transcription complex subunit 8 isoform X1

      UniProtKB/TrEMBL
      A0A9L0R189
      Conserved Domains (1) summary
      cl23804
      Location:1 → 263
      CAF1; CAF1 family ribonuclease

    3. XM_023617362.1 → XP_023473130.1  CCR4-NOT transcription complex subunit 8 isoform X1

      UniProtKB/TrEMBL
      A0A9L0R189
      Conserved Domains (1) summary
      cl23804
      Location:1 → 263
      CAF1; CAF1 family ribonuclease

    4. XM_001917441.5 → XP_001917476.3  CCR4-NOT transcription complex subunit 8 isoform X1

      UniProtKB/TrEMBL
      A0A9L0R189
      Related
      ENSECAP00000011166.3, ENSECAT00000014014.3
      Conserved Domains (1) summary
      cl23804
      Location:1 → 263
      CAF1; CAF1 family ribonuclease

    5. XM_023617364.1 → XP_023473132.1  CCR4-NOT transcription complex subunit 8 isoform X2

      UniProtKB/TrEMBL
      K9KCJ8
      Conserved Domains (1) summary
      cl23804
      Location:8 → 167
      CAF1; CAF1 family ribonuclease
    Nucleotide Protein
    Heading Accession and Version

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