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    NCAPD2 non-SMC condensin I complex subunit D2 [ Equus caballus (horse) ]

    Gene ID: 100059757, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NCAPD2provided by VGNC
    Official Full Name
    non-SMC condensin I complex subunit D2provided by VGNC
    Primary source
    VGNC:VGNC:20575
    See related
    Ensembl:ENSECAG00000017796
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See NCAPD2 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    32
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 6 NC_009149.3 (35062050..35089153)

    Chromosome 6 - NC_009149.3Genomic Context describing neighboring genes Neighboring gene TAP binding protein like Neighboring gene vesicle associated membrane protein 1 Neighboring gene mitochondrial ribosomal protein L51 Neighboring gene small nucleolar RNA U85 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase Neighboring gene intermediate filament family orphan 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009149.3 Chromosome 6 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in meiotic chromosome condensation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic chromosome condensation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in condensed chromosome, centromeric region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of condensin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    condensin complex subunit 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009149.3 Reference EquCab3.0 Primary Assembly

      Range
      35062050..35089153
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001495940.5 → XP_001495990.1  condensin complex subunit 1 isoform X1

      UniProtKB/TrEMBL
      A0A9L0TA77
      Related
      ENSECAP00000083195.1, ENSECAT00000108130.1
      Conserved Domains (3) summary
      COG5098
      Location:60 → 1243
      COG5098; Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics / Cell division and chromosome partitioning]
      pfam12717
      Location:1067 → 1232
      Cnd1; non-SMC mitotic condensation complex subunit 1
      pfam12922
      Location:75 → 240
      Cnd1_N; non-SMC mitotic condensation complex subunit 1, N-term

    2. XM_023643029.1 → XP_023498797.1  condensin complex subunit 1 isoform X2

      UniProtKB/TrEMBL
      A0A9L0SHG8
      Conserved Domains (1) summary
      cl26274
      Location:2 → 997
      Cnd1_N; non-SMC mitotic condensation complex subunit 1, N-term
    Nucleotide Protein
    Heading Accession and Version

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