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    KCND3 potassium voltage-gated channel subfamily D member 3 [ Equus caballus (horse) ]

    Gene ID: 100058973, updated on 17-Aug-2024

    Summary

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    Official Symbol
    KCND3provided by VGNC
    Official Full Name
    potassium voltage-gated channel subfamily D member 3provided by VGNC
    Primary source
    VGNC:VGNC:19270
    See related
    Ensembl:ENSECAG00000011594
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See KCND3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 5 NC_009148.3 (53005532..53215197)

    Chromosome 5 - NC_009148.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111773553 Neighboring gene uncharacterized LOC111773554 Neighboring gene DEAD-box helicase 20 Neighboring gene inka box actin regulator 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009148.3 Chromosome 5 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables A-type (transient outward) potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in potassium ion export across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein homooligomerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in dendritic spine IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuronal cell body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of voltage-gated potassium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    potassium voltage-gated channel subfamily D member 3
    Names
    potassium voltage-gated channel, Shal-related subfamily, member 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009148.3 Reference EquCab3.0 Primary Assembly

      Range
      53005532..53215197
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023641416.1 → XP_023497184.1  potassium voltage-gated channel subfamily D member 3 isoform X1

      UniProtKB/TrEMBL
      F7ANT1
      Conserved Domains (3) summary
      cd18419
      Location:6 → 143
      BTB_POZ_KCND3; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium voltage-gated channel subfamily D member 3 (KCND3)
      pfam00520
      Location:186 → 412
      Ion_trans; Ion transport protein
      pfam11879
      Location:442 → 563
      DUF3399; Domain of unknown function (DUF3399)

    2. XM_023641418.1 → XP_023497186.1  potassium voltage-gated channel subfamily D member 3 isoform X2

      UniProtKB/TrEMBL
      A0A3Q2HLA6
      Related
      ENSECAP00000035576.1, ENSECAT00000062331.2
      Conserved Domains (3) summary
      cd18419
      Location:6 → 143
      BTB_POZ_KCND3; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium voltage-gated channel subfamily D member 3 (KCND3)
      pfam00520
      Location:186 → 412
      Ion_trans; Ion transport protein
      pfam11879
      Location:442 → 544
      DUF3399; Domain of unknown function (DUF3399)

    3. XM_023641417.1 → XP_023497185.1  potassium voltage-gated channel subfamily D member 3 isoform X1

      UniProtKB/TrEMBL
      F7ANT1
      Related
      ENSECAP00000009544.1, ENSECAT00000012118.3
      Conserved Domains (3) summary
      cd18419
      Location:6 → 143
      BTB_POZ_KCND3; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium voltage-gated channel subfamily D member 3 (KCND3)
      pfam00520
      Location:186 → 412
      Ion_trans; Ion transport protein
      pfam11879
      Location:442 → 563
      DUF3399; Domain of unknown function (DUF3399)
    Nucleotide Protein
    Heading Accession and Version

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