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    VPS33A VPS33A core subunit of CORVET and HOPS complexes [ Equus caballus (horse) ]

    Gene ID: 100058750, updated on 17-Aug-2024

    Summary

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    Official Symbol
    VPS33Aprovided by VGNC
    Official Full Name
    VPS33A core subunit of CORVET and HOPS complexesprovided by VGNC
    Primary source
    VGNC:VGNC:110133
    See related
    Ensembl:ENSECAG00000021593
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See VPS33A in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 8 NC_009151.3 (24980505..25000689, complement)

    Chromosome 8 - NC_009151.3Genomic Context describing neighboring genes Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 Neighboring gene diablo IAP-binding mitochondrial protein Neighboring gene CAP-Gly domain containing linker protein 1 Neighboring gene uncharacterized LOC111774664 Neighboring gene zinc finger CCHC-type containing 8 Neighboring gene small nucleolar RNA SNORA9

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009151.3 Chromosome 8 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of CORVET complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vacuolar protein sorting-associated protein 33A
    Names
    VPS33A, CORVET/HOPS core subunit
    vacuolar protein sorting 33 homolog A
    vacuolar protein sorting 33A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009151.3 Reference EquCab3.0 Primary Assembly

      Range
      24980505..25000689 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005612619.3 → XP_005612676.1  vacuolar protein sorting-associated protein 33A isoform X2

      See identical proteins and their annotated locations for XP_005612676.1

      UniProtKB/TrEMBL
      K9KDW7
      Conserved Domains (1) summary
      pfam00995
      Location:53 → 479
      Sec1; Sec1 family

    2. XM_001496784.6 → XP_001496834.1  vacuolar protein sorting-associated protein 33A isoform X1

      See identical proteins and their annotated locations for XP_001496834.1

      UniProtKB/TrEMBL
      F6XZM7
      Related
      ENSECAP00000041200.1, ENSECAT00000062539.2
      Conserved Domains (1) summary
      pfam00995
      Location:34 → 584
      Sec1; Sec1 family
    Nucleotide Protein
    Heading Accession and Version

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