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    PDE12 phosphodiesterase 12 [ Equus caballus (horse) ]

    Gene ID: 100058532, updated on 8-Mar-2024

    Summary

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    Official Symbol
    PDE12provided by VGNC
    Official Full Name
    phosphodiesterase 12provided by VGNC
    Primary source
    VGNC:VGNC:21238
    See related
    Ensembl:ENSECAG00000005326
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See PDE12 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current EquCab3.0 (GCF_002863925.1) 16 NC_009159.3 (32307970..32313190, complement)
    102 previous assembly EquCab2.0 (GCF_000002305.2) 16 NC_009159.2 (30804352..30809904, complement)

    Chromosome 16 - NC_009159.3Genomic Context describing neighboring genes Neighboring gene ATP synthase F(0) complex subunit C2, mitochondrial pseudogene Neighboring gene ADP ribosylation factor 4 Neighboring gene dynein axonemal heavy chain 12 Neighboring gene non-POU domain-containing octamer-binding protein pseudogene Neighboring gene uncharacterized LOC111768322

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3'-5'-RNA exonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    2',5'-phosphodiesterase 12
    Names
    2',5'-phosphodiesterase 12-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009159.3 Reference EquCab3.0 Primary Assembly

      Range
      32307970..32313190 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001489974.5 → XP_001490024.3  2',5'-phosphodiesterase 12

      UniProtKB/TrEMBL
      F7CUF8
      Related
      ENSECAP00000003951.2, ENSECAT00000005601.4
      Conserved Domains (1) summary
      cl00490
      Location:299 → 608
      EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases
    Research Materials