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    TMEM79 transmembrane protein 79 [ Equus caballus (horse) ]

    Gene ID: 100057797, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TMEM79provided by VGNC
    Official Full Name
    transmembrane protein 79provided by VGNC
    Primary source
    VGNC:VGNC:24316
    See related
    Ensembl:ENSECAG00000001165
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See TMEM79 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 5 NC_009148.3 (38530869..38537116, complement)

    Chromosome 5 - NC_009148.3Genomic Context describing neighboring genes Neighboring gene chaperonin containing TCP1 subunit 3 Neighboring gene uncharacterized LOC106783191 Neighboring gene glycosylated lysosomal membrane protein Neighboring gene SMG5 nonsense mediated mRNA decay factor Neighboring gene uncharacterized LOC111773511 Neighboring gene progestin and adipoQ receptor family member 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009148.3 Chromosome 5 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulated exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in lysosomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in trans-Golgi network membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transmembrane protein 79

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009148.3 Reference EquCab3.0 Primary Assembly

      Range
      38530869..38537116 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023641013.1 → XP_023496781.1  transmembrane protein 79 isoform X3

    2. XM_014739945.2 → XP_014595431.1  transmembrane protein 79 isoform X1

    3. XM_001500083.4 → XP_001500133.1  transmembrane protein 79 isoform X2

      See identical proteins and their annotated locations for XP_001500133.1

      UniProtKB/TrEMBL
      A0A9L0SR79, F7D701
      Related
      ENSECAP00000000914.3, ENSECAT00000001162.4

    4. XM_014739946.2 → XP_014595432.1  transmembrane protein 79 isoform X5

      UniProtKB/TrEMBL
      A0A9L0SR79

    5. XM_023641014.1 → XP_023496782.1  transmembrane protein 79 isoform X4

      UniProtKB/TrEMBL
      A0A9L0SR79
    Nucleotide Protein
    Heading Accession and Version

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