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    TSC22D2 TSC22 domain family member 2 [ Equus caballus (horse) ]

    Gene ID: 100057563, updated on 8-Mar-2024

    Summary

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    Official Symbol
    TSC22D2provided by VGNC
    Official Full Name
    TSC22 domain family member 2provided by VGNC
    Primary source
    VGNC:VGNC:58758
    See related
    Ensembl:ENSECAG00000024811
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See TSC22D2 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current EquCab3.0 (GCF_002863925.1) 16 NC_009159.3 (84612926..84666508)
    102 previous assembly EquCab2.0 (GCF_000002305.2) 16 NC_009159.2 (83019799..83070478)

    Chromosome 16 - NC_009159.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111768449 Neighboring gene uncharacterized LOC102150363 Neighboring gene uncharacterized LOC111768450 Neighboring gene stress associated endoplasmic reticulum protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    TSC22 domain family protein 2
    Names
    TSC22 domain family protein 2-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009159.3 Reference EquCab3.0 Primary Assembly

      Range
      84612926..84666508
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023621104.1 → XP_023476872.1  TSC22 domain family protein 2 isoform X4

      Conserved Domains (1) summary
      cl26464
      Location:380 → 611
      Atrophin-1; Atrophin-1 family

    2. XM_023621101.1 → XP_023476869.1  TSC22 domain family protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A3Q2HRQ2
      Related
      ENSECAP00000036763.1, ENSECAT00000030771.2
      Conserved Domains (2) summary
      pfam01166
      Location:679 → 735
      TSC22; TSC-22/dip/bun family
      cl26464
      Location:380 → 611
      Atrophin-1; Atrophin-1 family

    3. XM_023621102.1 → XP_023476870.1  TSC22 domain family protein 2 isoform X2

      UniProtKB/TrEMBL
      F6RDT9
      Related
      ENSECAP00000022338.2, ENSECAT00000026741.3
      Conserved Domains (2) summary
      pfam01166
      Location:673 → 729
      TSC22; TSC-22/dip/bun family
      cl26464
      Location:380 → 611
      Atrophin-1; Atrophin-1 family

    4. XM_023621103.1 → XP_023476871.1  TSC22 domain family protein 2 isoform X3

      UniProtKB/TrEMBL
      A0A9L0RK44
      Related
      ENSECAP00000062910.1, ENSECAT00000087122.1
      Conserved Domains (2) summary
      pfam01166
      Location:649 → 705
      TSC22; TSC-22/dip/bun family
      cl26464
      Location:380 → 611
      Atrophin-1; Atrophin-1 family

    RNA

    1. XR_002800843.1 RNA Sequence

    2. XR_002800842.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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    Research Materials