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    MEIS2 Meis homeobox 2 [ Equus caballus (horse) ]

    Gene ID: 100057556, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MEIS2provided by VGNC
    Official Full Name
    Meis homeobox 2provided by VGNC
    Primary source
    VGNC:VGNC:20102
    See related
    Ensembl:ENSECAG00000016870
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See MEIS2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 1 NC_009144.3 (152602289..152804355)

    Chromosome 1 - NC_009144.3Genomic Context describing neighboring genes Neighboring gene transmembrane and coiled-coil domain-containing protein 5A-like Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC111768331 Neighboring gene uncharacterized LOC106782188 Neighboring gene CDAN1 interacting nuclease 1 Neighboring gene uncharacterized LOC111769667

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009144.3 Chromosome 1 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in animal organ morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in brain development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in embryonic pattern specification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in eye development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    homeobox protein Meis2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009144.3 Reference EquCab3.0 Primary Assembly

      Range
      152602289..152804355
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005603161.3 → XP_005603218.1  homeobox protein Meis2 isoform X4

      See identical proteins and their annotated locations for XP_005603218.1

      Conserved Domains (3) summary
      pfam05920
      Location:281 → 320
      Homeobox_KN; Homeobox KN domain
      pfam09770
      Location:322 → 450
      PAT1; Topoisomerase II-associated protein PAT1
      pfam16493
      Location:97 → 181
      Meis_PKNOX_N; N-terminal of Homeobox Meis and PKNOX1

    2. XM_001503626.6 → XP_001503676.2  homeobox protein Meis2 isoform X1

      See identical proteins and their annotated locations for XP_001503676.2

      UniProtKB/TrEMBL
      A0A9L0TPE6
      Related
      ENSECAP00000088876.1, ENSECAT00000135791.1
      Conserved Domains (3) summary
      pfam05920
      Location:294 → 333
      Homeobox_KN; Homeobox KN domain
      pfam09770
      Location:335 → 463
      PAT1; Topoisomerase II-associated protein PAT1
      pfam16493
      Location:110 → 194
      Meis_PKNOX_N; N-terminal of Homeobox Meis and PKNOX1

    3. XM_003363527.4 → XP_003363575.1  homeobox protein Meis2 isoform X3

      See identical proteins and their annotated locations for XP_003363575.1

      Conserved Domains (2) summary
      pfam05920
      Location:294 → 333
      Homeobox_KN; Homeobox KN domain
      pfam16493
      Location:110 → 194
      Meis_PKNOX_N; N-terminal of Homeobox Meis and PKNOX1

    4. XM_005603162.3 → XP_005603219.1  homeobox protein Meis2 isoform X5

      See identical proteins and their annotated locations for XP_005603219.1

      UniProtKB/TrEMBL
      A0A3Q2I3J6, A0A9L0SB46
      Related
      ENSECAP00000073348.1, ENSECAT00000082533.1
      Conserved Domains (2) summary
      pfam05920
      Location:294 → 333
      Homeobox_KN; Homeobox KN domain
      pfam16493
      Location:110 → 194
      Meis_PKNOX_N; N-terminal of Homeobox Meis and PKNOX1

    5. XM_005603163.3 → XP_005603220.1  homeobox protein Meis2 isoform X7

      See identical proteins and their annotated locations for XP_005603220.1

      UniProtKB/TrEMBL
      A0A3Q2I3J6
      Related
      ENSECAP00000014712.4, ENSECAT00000018059.4
      Conserved Domains (2) summary
      pfam05920
      Location:294 → 333
      Homeobox_KN; Homeobox KN domain
      pfam16493
      Location:110 → 194
      Meis_PKNOX_N; N-terminal of Homeobox Meis and PKNOX1

    6. XM_023620389.1 → XP_023476157.1  homeobox protein Meis2 isoform X2

      Conserved Domains (3) summary
      pfam05920
      Location:293 → 332
      Homeobox_KN; Homeobox KN domain
      pfam09770
      Location:334 → 462
      PAT1; Topoisomerase II-associated protein PAT1
      pfam16493
      Location:109 → 193
      Meis_PKNOX_N; N-terminal of Homeobox Meis and PKNOX1

    7. XM_023620406.1 → XP_023476174.1  homeobox protein Meis2 isoform X6

      UniProtKB/TrEMBL
      A0A3Q2I3J6
      Related
      ENSECAP00000040810.2, ENSECAT00000046179.2
      Conserved Domains (2) summary
      pfam05920
      Location:293 → 332
      Homeobox_KN; Homeobox KN domain
      pfam16493
      Location:109 → 193
      Meis_PKNOX_N; N-terminal of Homeobox Meis and PKNOX1

    8. XM_023620413.1 → XP_023476181.1  homeobox protein Meis2 isoform X8

      UniProtKB/TrEMBL
      A0A3Q2I3J6
      Related
      ENSECAP00000042429.2, ENSECAT00000052450.2
      Conserved Domains (2) summary
      pfam05920
      Location:293 → 332
      Homeobox_KN; Homeobox KN domain
      pfam16493
      Location:109 → 193
      Meis_PKNOX_N; N-terminal of Homeobox Meis and PKNOX1

    9. XM_014733941.2 → XP_014589427.1  homeobox protein Meis2 isoform X9

      Conserved Domains (2) summary
      pfam05920
      Location:209 → 248
      Homeobox_KN; Homeobox KN domain
      pfam16493
      Location:25 → 108
      Meis_PKNOX_N; N-terminal of Homeobox Meis and PKNOX1
    Nucleotide Protein
    Heading Accession and Version

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