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    TMEM86A transmembrane protein 86A [ Equus caballus (horse) ]

    Gene ID: 100057256, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TMEM86Aprovided by VGNC
    Official Full Name
    transmembrane protein 86Aprovided by VGNC
    Primary source
    VGNC:VGNC:24318
    See related
    Ensembl:ENSECAG00000011358
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See TMEM86A in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 7 NC_009150.3 (89063187..89070145)

    Chromosome 7 - NC_009150.3Genomic Context describing neighboring genes Neighboring gene UEV and lactate/malate dehyrogenase domains Neighboring gene SPT2 chromatin protein domain containing 1 Neighboring gene immunoglobulin superfamily member 22 Neighboring gene protein tyrosine phosphatase non-receptor type 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009150.3 Chromosome 7 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lysoplasmalogenase TMEM86A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009150.3 Reference EquCab3.0 Primary Assembly

      Range
      89063187..89070145
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014741880.2 → XP_014597366.1  lysoplasmalogenase TMEM86A isoform X2

      UniProtKB/TrEMBL
      A0A5F5PTB4
      Related
      ENSECAP00000051024.1, ENSECAT00000077390.2
      Conserved Domains (1) summary
      pfam07947
      Location:148 → 276
      YhhN; YhhN-like protein

    2. XM_014741878.2 → XP_014597364.1  lysoplasmalogenase TMEM86A isoform X1

      UniProtKB/TrEMBL
      A0A3Q2H2Z4
      Related
      ENSECAP00000027543.2, ENSECAT00000043502.3
      Conserved Domains (1) summary
      pfam07947
      Location:133 → 320
      YhhN; YhhN-like protein

    3. XM_014741879.2 → XP_014597365.1  lysoplasmalogenase TMEM86A isoform X1

      UniProtKB/TrEMBL
      A0A3Q2H2Z4
      Conserved Domains (1) summary
      pfam07947
      Location:133 → 320
      YhhN; YhhN-like protein

    4. XM_001504973.4 → XP_001505023.1  lysoplasmalogenase TMEM86A isoform X3

      UniProtKB/TrEMBL
      F7AQS3
      Conserved Domains (1) summary
      pfam07947
      Location:37 → 224
      YhhN; YhhN-like protein
    Nucleotide Protein
    Heading Accession and Version

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