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    SDSL serine dehydratase like [ Equus caballus (horse) ]

    Gene ID: 100056350, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SDSLprovided by VGNC
    Official Full Name
    serine dehydratase likeprovided by VGNC
    Primary source
    VGNC:VGNC:22780
    See related
    Ensembl:ENSECAG00000022258
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 8
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 8 NC_009151.3 (21597005..21610807, complement)

    Chromosome 8 - NC_009151.3Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 19 Neighboring gene uncharacterized LOC111774646 Neighboring gene LIM homeobox 5 Neighboring gene phospholipase B domain containing 2 Neighboring gene serine dehydratase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009151.3 Chromosome 8 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-serine ammonia-lyase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables threonine deaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-serine catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in isoleucine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in threonine catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine dehydratase-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009151.3 Reference EquCab3.0 Primary Assembly

      Range
      21597005..21610807 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023647110.1 → XP_023502878.1  serine dehydratase-like isoform X1

      UniProtKB/TrEMBL
      A0A3Q2LE78
      Conserved Domains (1) summary
      cl00342
      Location:17 → 336
      Trp-synth-beta_II; Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan ...

    2. XM_014727575.2 → XP_014583061.1  serine dehydratase-like isoform X1

      UniProtKB/TrEMBL
      A0A3Q2LE78
      Conserved Domains (1) summary
      cl00342
      Location:17 → 336
      Trp-synth-beta_II; Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan ...

    3. XM_023647109.1 → XP_023502877.1  serine dehydratase-like isoform X1

      UniProtKB/TrEMBL
      A0A3Q2LE78
      Related
      ENSECAP00000038798.2, ENSECAT00000047786.3
      Conserved Domains (1) summary
      cl00342
      Location:17 → 336
      Trp-synth-beta_II; Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan ...

    4. XM_001490133.5 → XP_001490183.1  serine dehydratase-like isoform X2

      UniProtKB/TrEMBL
      A0A9L0SJN5
      Related
      ENSECAP00000076294.1, ENSECAT00000132469.1
      Conserved Domains (1) summary
      cl00342
      Location:17 → 326
      Trp-synth-beta_II; Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan ...
    Nucleotide Protein
    Heading Accession and Version

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