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    TFAP2D transcription factor AP-2 delta [ Equus caballus (horse) ]

    Gene ID: 100056165, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TFAP2Dprovided by VGNC
    Official Full Name
    transcription factor AP-2 deltaprovided by VGNC
    Primary source
    VGNC:VGNC:24031
    See related
    Ensembl:ENSECAG00000012285
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See TFAP2D in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 20 NC_009163.3 (49630479..49684610)

    Chromosome 20 - NC_009163.3Genomic Context describing neighboring genes Neighboring gene beta-defensin 110 Neighboring gene uncharacterized LOC111769228 Neighboring gene 40S ribosomal protein S27-like Neighboring gene transcription factor AP-2 beta

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009163.3 Chromosome 20 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in anatomical structure development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor AP-2-delta

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009163.3 Reference EquCab3.0 Primary Assembly

      Range
      49630479..49684610
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001502872.4 → XP_001502922.2  transcription factor AP-2-delta

      UniProtKB/TrEMBL
      F6RYT1
      Related
      ENSECAP00000010165.2, ENSECAT00000012863.4
      Conserved Domains (1) summary
      pfam03299
      Location:211 → 405
      TF_AP-2; Transcription factor AP-2
    Nucleotide Protein
    Heading Accession and Version

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