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    ZBTB8A zinc finger and BTB domain containing 8A [ Equus caballus (horse) ]

    Gene ID: 100055796, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZBTB8Aprovided by VGNC
    Official Full Name
    zinc finger and BTB domain containing 8Aprovided by VGNC
    Primary source
    VGNC:VGNC:25157
    See related
    Ensembl:ENSECAG00000023392
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See ZBTB8A in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 2 NC_009145.3 (24299246..24358772, complement)

    Chromosome 2 - NC_009145.3Genomic Context describing neighboring genes Neighboring gene syncoilin, intermediate filament protein Neighboring gene RB binding protein 4, chromatin remodeling factor Neighboring gene zinc finger and BTB domain containing 8 opposite strand Neighboring gene zinc finger and BTB domain containing 8B Neighboring gene BSD domain containing 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009145.3 Chromosome 2 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger and BTB domain-containing protein 8A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009145.3 Reference EquCab3.0 Primary Assembly

      Range
      24299246..24358772 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023634279.1 → XP_023490047.1  zinc finger and BTB domain-containing protein 8A isoform X2

      UniProtKB/TrEMBL
      A0A3Q2H2Q0, A0A9L0SU55
      Related
      ENSECAP00000027438.1, ENSECAT00000043167.2
      Conserved Domains (4) summary
      COG5048
      Location:331 → 384
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:333 → 353
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:63 → 171
      BTB; BTB/POZ domain
      pfam13465
      Location:345 → 370
      zf-H2C2_2; Zinc-finger double domain

    2. XM_023634285.1 → XP_023490053.1  zinc finger and BTB domain-containing protein 8A isoform X1

      UniProtKB/TrEMBL
      A0A9L0SCK5, A0A9L0TG85
      Related
      ENSECAP00000087268.1, ENSECAT00000092756.1
      Conserved Domains (3) summary
      sd00017
      Location:284 → 304
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:14 → 122
      BTB; BTB/POZ domain
      pfam13465
      Location:296 → 321
      zf-H2C2_2; Zinc-finger double domain

    3. XM_023634294.1 → XP_023490062.1  zinc finger and BTB domain-containing protein 8A isoform X1

      UniProtKB/TrEMBL
      A0A9L0SCK5, A0A9L0TG85
      Conserved Domains (3) summary
      sd00017
      Location:284 → 304
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:14 → 122
      BTB; BTB/POZ domain
      pfam13465
      Location:296 → 321
      zf-H2C2_2; Zinc-finger double domain

    4. XM_023634281.1 → XP_023490049.1  zinc finger and BTB domain-containing protein 8A isoform X1

      UniProtKB/TrEMBL
      A0A9L0SCK5, A0A9L0TG85
      Conserved Domains (3) summary
      sd00017
      Location:284 → 304
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:14 → 122
      BTB; BTB/POZ domain
      pfam13465
      Location:296 → 321
      zf-H2C2_2; Zinc-finger double domain

    5. XM_014737455.2 → XP_014592941.1  zinc finger and BTB domain-containing protein 8A isoform X1

      UniProtKB/TrEMBL
      A0A9L0SCK5, A0A9L0TG85
      Conserved Domains (3) summary
      sd00017
      Location:284 → 304
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:14 → 122
      BTB; BTB/POZ domain
      pfam13465
      Location:296 → 321
      zf-H2C2_2; Zinc-finger double domain

    6. XM_023634300.1 → XP_023490068.1  zinc finger and BTB domain-containing protein 8A isoform X1

      UniProtKB/TrEMBL
      A0A9L0SCK5, A0A9L0TG85
      Conserved Domains (3) summary
      sd00017
      Location:284 → 304
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:14 → 122
      BTB; BTB/POZ domain
      pfam13465
      Location:296 → 321
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
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