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    SLC18A1 solute carrier family 18 member A1 [ Equus caballus (horse) ]

    Gene ID: 100055485, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC18A1provided by VGNC
    Official Full Name
    solute carrier family 18 member A1provided by VGNC
    Primary source
    VGNC:VGNC:23055
    See related
    Ensembl:ENSECAG00000013343
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See SLC18A1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 2 NC_009145.3 (49521375..49541951, complement)

    Chromosome 2 - NC_009145.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111770340 Neighboring gene lipoprotein lipase Neighboring gene uncharacterized LOC111772486 Neighboring gene ATPase H+ transporting V1 subunit B2 Neighboring gene uncharacterized LOC111772487

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009145.3 Chromosome 2 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serotonin:sodium:chloride symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables xenobiotic transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in aminergic neurotransmitter loading into synaptic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in xenobiotic transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in synaptic vesicle membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in terminal bouton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chromaffin granule amine transporter
    Names
    solute carrier family 18 (vesicular monoamine), member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009145.3 Reference EquCab3.0 Primary Assembly

      Range
      49521375..49541951 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023636100.1 → XP_023491868.1  chromaffin granule amine transporter isoform X1

      UniProtKB/TrEMBL
      A0A5F5PTS4, F7AQ57
      Related
      ENSECAP00000011544.1, ENSECAT00000014437.4
      Conserved Domains (2) summary
      TIGR00880
      Location:140 → 281
      2_A_01_02; Multidrug resistance protein
      pfam07690
      Location:139 → 445
      MFS_1; Major Facilitator Superfamily

    2. XM_023636101.1 → XP_023491869.1  chromaffin granule amine transporter isoform X2

      UniProtKB/TrEMBL
      A0A5F5PSZ3, A0A5F5PTS4
      Related
      ENSECAP00000050904.1, ENSECAT00000071947.2
      Conserved Domains (2) summary
      TIGR00880
      Location:140 → 281
      2_A_01_02; Multidrug resistance protein
      pfam07690
      Location:139 → 444
      MFS_1; Major Facilitator Superfamily
    Nucleotide Protein
    Heading Accession and Version

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