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    RAB18 RAB18, member RAS oncogene family [ Equus caballus (horse) ]

    Gene ID: 100055256, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RAB18provided by VGNC
    Official Full Name
    RAB18, member RAS oncogene familyprovided by VGNC
    Primary source
    VGNC:VGNC:22091
    See related
    Ensembl:ENSECAG00000017521
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Annotation information
    Annotation category: suggests misassembly
    Orthologs
    human mouse all
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    Genomic context

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    See RAB18 in Genome Data Viewer
    Location:
    chromosome: 29
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 29 NC_009172.3 (10687542..10723255, complement)

    Chromosome 29 - NC_009172.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106782757 Neighboring gene uncharacterized LOC106782740 Neighboring gene mohawk homeobox Neighboring gene patched domain containing 3 Neighboring gene uncharacterized LOC102150897

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009172.3 Chromosome 29 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras-related protein Rab-18
    Names
    ras-related protein rab-18-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001308960.1 → NP_001295889.1  ras-related protein Rab-18

      See identical proteins and their annotated locations for NP_001295889.1

      Status: PROVISIONAL

      Source sequence(s)
      JL616370, PJAA01000030
      UniProtKB/TrEMBL
      A0A9L0SQM8, K9K3M3
      Related
      ENSECAP00000076293.1, ENSECAT00000146843.1
      Conserved Domains (1) summary
      cd01863
      Location:9 → 169
      Rab18; Rab GTPase family 18 (Rab18)

    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009172.3 Reference EquCab3.0 Primary Assembly

      Range
      10687542..10723255 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023631885.1 → XP_023487653.1  ras-related protein Rab-18 isoform X1

      UniProtKB/TrEMBL
      A0A9L0SB31
      Related
      ENSECAP00000073333.1, ENSECAT00000132086.1
      Conserved Domains (1) summary
      cl21455
      Location:37 → 159
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Research Materials