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    CEP43 centrosomal protein 43 [ Equus caballus (horse) ]

    Gene ID: 100055208, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CEP43provided by VGNC
    Official Full Name
    centrosomal protein 43provided by VGNC
    Primary source
    VGNC:VGNC:18023
    See related
    Ensembl:ENSECAG00000019040
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Also known as
    FGFR1OP
    Orthologs
    human mouse all
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    Genomic context

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    See CEP43 in Genome Data Viewer
    Location:
    chromosome: 31
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 31 NC_009174.3 (3073278..3104730, complement)

    Chromosome 31 - NC_009174.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102149256 Neighboring gene C-C motif chemokine receptor 6 Neighboring gene ribonuclease T2 Neighboring gene ribosomal protein S6 kinase A2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009174.3 Chromosome 31 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule anchoring IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    centrosomal protein 43
    Names
    FGFR1 oncogene partner
    FGFR1 oncoprotein partner-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009174.3 Reference EquCab3.0 Primary Assembly

      Range
      3073278..3104730 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023633133.1 → XP_023488901.1  centrosomal protein 43 isoform X1

      UniProtKB/TrEMBL
      A0A3Q2L4U3
      Conserved Domains (1) summary
      pfam09398
      Location:54 → 134
      FOP_dimer; FOP N terminal dimerisation domain

    2. XM_023633134.1 → XP_023488902.1  centrosomal protein 43 isoform X2

      UniProtKB/TrEMBL
      A0A3Q2L4U3
      Related
      ENSECAP00000033168.3, ENSECAT00000042469.3
      Conserved Domains (1) summary
      pfam09398
      Location:54 → 134
      FOP_dimer; FOP N terminal dimerisation domain
    Nucleotide Protein
    Heading Accession and Version

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